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10X faster predict by replacing DataFrame with dict #2299
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@tcuongd can we please merge this and release a new version with wheels for python 3.11 as well? |
@tcuongd any updates on this? It should be really easy to integrate and yields a big runtime improvement |
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Wow great find, thanks heaps! Yeah I think changing the return type for these internal functions is fine, we just need to make it clear which functions are affected in the release notes.
For some reason CI didn't kick off, I'll take a look later |
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@orenmatar Do you mind just signing the CLA? Thanks! |
@tcuongd Signed it just now |
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Profiling the predict code yielded this result:
Evidently about 90% of the predict time is spent on either the init of a DataFrame or its getitem method, both are notoriously slow.
A very simple change from dataframe to dict in sample_model and sample_model_vectorized has no risk and implications beyond sample_posterior_predictive since the df is converted to a dict there anyway.
Profiling after the change gives:
and in runtime it was reduced from ~300ml to ~38ml on a local test