Bambino: SNP caller and Alignment Viewer for Next Gen Data
More Information at: https://cgwb.nci.nih.gov/goldenPath/bamview/documentation/index.html
Website for access to TCGA and public data sets : https://cgwb.nci.nih.gov/cgi-bin/bambino
Written in Java. Uses 3rd party libraries (in jar files).
Original author is Michael Edmonson at NIH (now at St. Judes).
Technical support from Richard Finney at NIH
Please cite :
Edmonson MN, Zhang J, Yan C, Finney RP, Meerzaman D, Buetow K . (2011) Bambino: a variant detector and alignment viewer for next-generation sequencing data in the SAM/BAM format. Bioinformatics 27: 865â866. doi:10.1093/bioinformatics/btr032.