Merge pull request #33 from ranocha/hr/dependabot #424
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: ['*'] | |
| pull_request: | |
| concurrency: | |
| # Skip intermediate builds: always. | |
| # Cancel intermediate builds: only if it is a pull request build. | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: ${{ startsWith(github.ref, 'refs/pull/') }} | |
| jobs: | |
| test: | |
| name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }} | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| P4EST_ROOT_DIR: "/opt/p4est/2.8.5/" | |
| JULIA_PETSC_LIBRARY: "/opt/petsc/3.18/lib/libpetsc" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| version: | |
| - '1.9' | |
| os: | |
| - ubuntu-latest | |
| arch: | |
| - x64 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Cache p4est | |
| id: cache-p4est | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{env.P4EST_ROOT_DIR}} | |
| key: ${{ runner.os }}-build-${{ env.P4EST_ROOT_DIR }}- | |
| restore-keys: | | |
| ${{ runner.os }}-build-${{ env.P4EST_ROOT_DIR }}- | |
| ${{ runner.os }}-build- | |
| ${{ runner.os }}- | |
| - uses: julia-actions/setup-julia@v1 | |
| with: | |
| version: ${{ matrix.version }} | |
| arch: ${{ matrix.arch }} | |
| - name: Install p4est/petsc dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y wget gfortran g++ openmpi-bin libopenmpi-dev | |
| - name: Install p4est | |
| if: steps.cache-p4est.outputs.cache-hit != 'true' | |
| run: | | |
| # Install p4est 2.8.5 from sources | |
| CURR_DIR=$(pwd) | |
| PACKAGE=p4est | |
| VERSION=2.8.5 | |
| INSTALL_ROOT=/opt | |
| P4EST_INSTALL=$INSTALL_ROOT/$PACKAGE/$VERSION | |
| TAR_FILE=$PACKAGE-$VERSION.tar.gz | |
| URL="https://github.com/p4est/p4est.github.io/raw/master/release" | |
| ROOT_DIR=/tmp | |
| SOURCES_DIR=$ROOT_DIR/$PACKAGE-$VERSION | |
| BUILD_DIR=$SOURCES_DIR/build | |
| wget -q $URL/$TAR_FILE -O $ROOT_DIR/$TAR_FILE | |
| mkdir -p $SOURCES_DIR | |
| tar xzf $ROOT_DIR/$TAR_FILE -C $SOURCES_DIR --strip-components=1 | |
| cd $SOURCES_DIR | |
| ./configure --prefix=$P4EST_INSTALL --without-blas --without-lapack --enable-mpi -disable-dependency-tracking | |
| make --quiet | |
| make --quiet install | |
| rm -rf $ROOT_DIR/$TAR_FILE $SOURCES_DIR | |
| cd $CURR_DIR | |
| - name: Install petsc | |
| ##if: steps.cache-petsc.outputs.cache-hit != 'true' | |
| run: | | |
| CURR_DIR=$(pwd) | |
| PACKAGE=petsc | |
| VERSION=3.18 | |
| INSTALL_ROOT=/opt | |
| PETSC_INSTALL=$INSTALL_ROOT/$PACKAGE/$VERSION | |
| TAR_FILE=$PACKAGE-$VERSION.tar.gz | |
| URL="https://ftp.mcs.anl.gov/pub/petsc/release-snapshots/" | |
| ROOT_DIR=/tmp | |
| SOURCES_DIR=$ROOT_DIR/$PACKAGE-$VERSION | |
| BUILD_DIR=$SOURCES_DIR/build | |
| wget -q $URL/$TAR_FILE -O $ROOT_DIR/$TAR_FILE | |
| mkdir -p $SOURCES_DIR | |
| tar xzf $ROOT_DIR/$TAR_FILE -C $SOURCES_DIR --strip-components=1 | |
| cd $SOURCES_DIR | |
| ./configure --prefix=$PETSC_INSTALL --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 \ | |
| --download-mumps --download-scalapack --download-parmetis --download-metis \ | |
| --download-ptscotch --with-debugging --with-x=0 --with-shared=1 \ | |
| --with-mpi=1 --with-64-bit-indices | |
| make | |
| make install | |
| - name: add MPIPreferences | |
| shell: julia --color=yes --project=. {0} | |
| run: | | |
| using Pkg | |
| Pkg.add("MPIPreferences") | |
| - name: use MPI system binary | |
| shell: julia --color=yes --project=. {0} | |
| run: | | |
| using MPIPreferences | |
| MPIPreferences.use_system_binary() | |
| - uses: julia-actions/julia-buildpkg@latest | |
| - run: echo $PWD | |
| - run: julia --project=. -e 'using Pkg; Pkg.instantiate(); Pkg.build(); Pkg.precompile()' | |
| - run: julia --project=. --color=yes --check-bounds=yes test/runtests.jl | |
| - uses: codecov/codecov-action@v1 | |
| with: | |
| file: lcov.info | |
| docs: | |
| name: Documentation | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: julia-actions/setup-julia@v1 | |
| with: | |
| version: '1' | |
| - uses: julia-actions/julia-buildpkg@v1 | |
| - uses: julia-actions/julia-docdeploy@v1 | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| - run: | | |
| julia --project=docs -e ' | |
| using Documenter: DocMeta, doctest | |
| using GridapSolvers | |
| DocMeta.setdocmeta!(GridapSolvers, :DocTestSetup, :(using GridapSolvers); recursive=true) | |
| doctest(GridapSolvers)' |