heber-augusto is collecting data using GitHub Actions 🚀 #283
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| name: Download files from SUS FTP (Google Drive) | |
| run-name: ${{ github.actor }} is collecting data using GitHub Actions 🚀 | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| states: | |
| description: 'States to collect files' | |
| required: false | |
| default: 'RO,AC,AM,RR,PA,AP,TO,MA,PI,CE,RN,PB,PE,AL,SE,BA,MG,ES,RJ,SP,PR,SC,RS,MS,MT,GO,DF' | |
| start_date: | |
| description: 'Start date (YYYY-MM-DD)' | |
| required: false | |
| end_date: | |
| description: 'End date (YYYY-MM-DD)' | |
| required: false | |
| # agendamento para execucao todo dia as 8:00 da manhã | |
| schedule: | |
| - cron: '0 8 * * *' | |
| jobs: | |
| Collecting-Data-Using-GitHub-Actions: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - run: echo "🎉 The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "🐧 This job is now running on a ${{ runner.os }} server hosted by GitHub!" | |
| - run: echo "🔎 The name of your branch is ${{ github.ref }} and your repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v3 | |
| - run: echo "💡 The ${{ github.repository }} repository has been cloned to the runner." | |
| - run: echo "🖥️ The workflow is now ready to test your code on the runner." | |
| - name: List files in the repository | |
| run: | | |
| ls ${{ github.workspace }} | |
| - name: 'google-auth' | |
| uses: 'google-github-actions/auth@v1' | |
| with: | |
| credentials_json: '${{ secrets.gd_credentials }}' | |
| - name: Create output | |
| run: | | |
| export OUTPUT_DIR=${{ github.workspace }}/output-files | |
| mkdir ${OUTPUT_DIR} | |
| - name: 'install gdfuse to access google team drive' | |
| run: | | |
| export OUTPUT_DIR=${{ github.workspace }}/output-files | |
| export XDG_CONFIG_HOME=$OUTPUT_DIR | |
| chmod +x ./auto-get-files/bin/mount_google_drive.sh | |
| ./auto-get-files/bin/mount_google_drive.sh '${{ github.workspace }}' '${{ secrets.serviceaccountuser }}' '${{ secrets.google_team_drive_id }}' $GOOGLE_APPLICATION_CREDENTIALS | |
| - name: Create temp dir | |
| run: | | |
| export TEMP_DIR=${{ github.workspace }}/temp-files | |
| mkdir ${TEMP_DIR} | |
| mkdir ${TEMP_DIR}/dbc-files | |
| chmod o+w ${TEMP_DIR}/dbc-files/. | |
| mkdir ${TEMP_DIR}/dbf-files | |
| chmod o+w ${TEMP_DIR}/dbf-files/. | |
| mkdir ${TEMP_DIR}/csv-files | |
| chmod o+w ${TEMP_DIR}/csv-files/. | |
| - name: Prepare permissions, scripts and call script to collect files | |
| working-directory: ./auto-get-files | |
| run: | | |
| chmod +x collect_from_ftp.sh | |
| cd ./blast | |
| gcc blast.c blast-dbf.c -o ../dbc-2-dbf | |
| cd .. | |
| chmod +x dbc-2-dbf | |
| export OUTPUT_DIR=${{ github.workspace }}/output-files/datalake/monitor | |
| export TEMP_DIR=${{ github.workspace }}/temp-files | |
| export DBC_DIR=${TEMP_DIR}/dbc-files | |
| export DBF_DIR=${TEMP_DIR}/dbf-files | |
| export CSV_DIR=${TEMP_DIR}/csv-files | |
| pip3 install -r ../requirements.txt | |
| export STATES=${{ github.event.inputs.states}} | |
| export START_DATE=${{ github.event.inputs.start_date}} | |
| export END_DATE=${{ github.event.inputs.end_date}} | |
| python3 ./main.py | |
| #ls ${OUTPUT_DIR} | |
| - run: echo "🍏 This job's status is ${{ job.status }}." | |
| - uses: gautamkrishnar/keepalive-workflow@v1 # using the workflow with default settings |