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  1. single-cell-genetics/vireo single-cell-genetics/vireo Public

    Demultiplexing pooled scRNA-seq data with or without genotype reference

    Python 73 27

  2. single-cell-genetics/cardelino single-cell-genetics/cardelino Public

    Clone identification from single-cell data

    R 59 12

  3. brie brie Public

    BRIE: Bayesian Regression for Isoform Estimate in Single Cells

    Python 41 15

  4. briekit briekit Public

    Preprocessing tool kit of BRIE project in splicing analysis

    Python 2 2

  5. diceseq diceseq Public

    Dynamic Isoform spliCing Estimator via sequencing data

    Python 2 1

  6. single-cell-genetics/cellSNP single-cell-genetics/cellSNP Public

    Pileup biallelic SNPs from single-cell and bulk RNA-seq data

    Python 75 11