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Update Workflows #130

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Sep 24, 2024
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27 changes: 22 additions & 5 deletions .github/workflows/R-CMD-check.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,9 @@ on:
branches: [main, master]
pull_request:
branches: [main, master]
workflow_dispatch:
schedule:
- cron: "47 14 * * 1" # <=== Set to run at 14:47 on Mondays (avoiding 00:00 and top of the hour runs gives us a better chance for getting server time)

name: R-CMD-check

Expand All @@ -29,21 +32,35 @@ jobs:
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v4
- id: checkout
uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2
- name: Setup for Hotfix/Release Testing
id: release-setup
if: "${{ contains(github.event.pull_request.head.ref, '/hotfix/') || contains(github.event.pull_request.head.ref, '/release/') }}"
run: |
# remove the remote declarations from the DESCRIPTION so that we
# test the released version
sed -i -e '/ hubverse-org/d' DESCRIPTION

- uses: r-lib/actions/setup-r@v2
- id: setup-pandoc
uses: r-lib/actions/setup-pandoc@v2

- id: setup-r
uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
extra-repositories: https://hubverse-org.r-universe.dev

- uses: r-lib/actions/setup-r-dependencies@v2
- id: fetch-dependencies
uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check

- uses: r-lib/actions/check-r-package@v2
- id: check
uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
3 changes: 2 additions & 1 deletion .github/workflows/test-coverage.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -20,6 +20,7 @@ jobs:
- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true
extra-repositories: https://hubverse-org.r-universe.dev

- uses: r-lib/actions/setup-r-dependencies@v2
with:
Expand All @@ -39,7 +40,7 @@ jobs:
if: always()
run: |
## --------------------------------------------------------------------
find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload test results
Expand Down
29 changes: 16 additions & 13 deletions README.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@ output: github_document

<!-- README.md is generated from README.Rmd. Please edit that file -->

```{r, include = FALSE}
```{r, include=FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
Expand All @@ -16,39 +16,42 @@ knitr::opts_chunk$set(
# hubEnsembles <img src="man/figures/logo.png" align="right" height="131" alt="" />

<!-- badges: start -->

[![Lifecycle: experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
[![R-CMD-check](https://github.com/hubverse-org/hubEnsembles/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/hubverse-org/hubEnsembles/actions/workflows/R-CMD-check.yaml)

<!-- badges: end -->

The goal of hubEnsembles is to provide standard implementations of commonly used methods for ensembling model outputs. The hubEnsembles package is part of [the hubverse project](https://hubverse.io/en/latest/) and expects all input data to the key functions to be formatted as an object of a [`model_out_tbl` class](https://hubverse-org.github.io/hubUtils/reference/as_model_out_tbl.html).
The goal of hubEnsembles is to provide standard implementations of commonly used methods for ensembling model outputs. The hubEnsembles package is part of [the hubverse project](https://hubverse.io/en/latest/) and expects all input data to the key functions to be formatted as an object of a [`model_out_tbl` class](https://hubverse-org.github.io/hubUtils/reference/as_model_out_tbl.html).

## Installation

You can install the development version of hubEnsembles using this code:
### Latest

``` r
remotes::install_github("hubverse-org/hubEnsembles")
```
You can install the [latest version of hubEnsembles from the R-universe](https://hubverse-org.r-universe.dev/hubEnsembles):

```r
install.packages("hubEnsembles", repos = c("https://hubverse-org.r-universe.dev", "https://cloud.r-project.org"))
```

<!--
## Example
### Development

This is a basic example which shows you how to solve a common problem:
If you want to test out new features that have not yet been released, you can install the development version of hubEnsembles from [GitHub](https://github.com/) with:

```{r example}
library(hubEnsembles)
## basic example code
```r
remotes::install_github("hubverse-org/hubEnsembles")
```

-->

***

## Code of Conduct

Please note that the hubEnsembles package is released with a [Contributor Code of Conduct](https://hubverse-org.github.io/hubEnsembles/CODE_OF_CONDUCT.html). By contributing to this project, you agree to abide by its terms.

## Contributing

Interested in contributing back to the open-source Hubverse project?
Learn more about how to [get involved in the Hubverse Community](https://hubverse.io/en/latest/overview/contribute.html) or [how to contribute to the hubEnsembles package](https://hubverse-org.github.io/hubEnsembles/CONTRIBUTING.html).


22 changes: 13 additions & 9 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -8,6 +8,7 @@
[![Lifecycle:
experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
[![R-CMD-check](https://github.com/hubverse-org/hubEnsembles/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/hubverse-org/hubEnsembles/actions/workflows/R-CMD-check.yaml)

<!-- badges: end -->

The goal of hubEnsembles is to provide standard implementations of
Expand All @@ -19,21 +20,24 @@ class](https://hubverse-org.github.io/hubUtils/reference/as_model_out_tbl.html).

## Installation

You can install the development version of hubEnsembles using this code:
### Latest

You can install the [latest version of hubEnsembles from the
R-universe](https://hubverse-org.r-universe.dev/hubEnsembles):

``` r
remotes::install_github("hubverse-org/hubEnsembles")
install.packages("hubEnsembles", repos = c("https://hubverse-org.r-universe.dev", "https://cloud.r-project.org"))
```

<!--
## Example
&#10;This is a basic example which shows you how to solve a common problem:
&#10;
### Development

If you want to test out new features that have not yet been released,
you can install the development version of hubEnsembles from
[GitHub](https://github.com/) with:

``` r
library(hubEnsembles)
## basic example code
remotes::install_github("hubverse-org/hubEnsembles")
```
&#10;-->

------------------------------------------------------------------------

Expand Down
3 changes: 3 additions & 0 deletions _pkgdown.yml
Original file line number Diff line number Diff line change
@@ -1,3 +1,6 @@
url: https://hubverse-org.github.io/hubEnsembles/
template:
package: hubStyle
development:
mode: auto

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