Test workflow #40

josefineegekvist · 2021-12-14T11:59:46Z

No description provided.

write tables

global r file to be run at the beggining of the VMS data processing.

1st step data cleaning and preprocessing

merge efallo and tacsat , coupe vms with logbook data

foramting, DATSU , quality control and submission

copy of the script created in the personal folder

…unchanged

…r trip' and 'Remove records with arrival date before departure time'. Added proposal to fix 'overlapping trips' part.

…nto test-workflow

…eflalo data

…nto test-workflow

…data

as well as the few lines needed when target species is known

…nto test-workflow

index

…nto test-workflow

roimartins and others added 30 commits April 27, 2021 23:47

Update VMSdatacall_proposedWorkflow.r

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write tables

Create global.R

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global r file to be run at the beggining of the VMS data processing.

Create 1_eflalo_tacsat_preprocessing.R

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1st step data cleaning and preprocessing

Rename global.R to 0_global.R

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Create 2_eflalo_tacsat_analysis.R

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merge efallo and tacsat , coupe vms with logbook data

Create 3_data_submission.R

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foramting, DATSU , quality control and submission

Create 1_eflalo_tacsat_preprocessing.R

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copy of the script created in the personal folder

add functions which will become icesDATSU

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* add function to get dataset version IDs and add dependencies

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Add main web services, and a worksheet to test things

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copied the four files comprising the workflow over to my own folder, …

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…unchanged

Changed the order of tho checks 'Remove trip with overlap with anothe…

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…r trip' and 'Remove records with arrival date before departure time'. Added proposal to fix 'overlapping trips' part.

Merge branch 'test-workflow' of https://github.com/ices-eg/wg_WGSFD i…

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…nto test-workflow

Merge branch 'test-workflow' of https://github.com/ices-eg/wg_WGSFD i…

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…nto test-workflow

added necessary shapfiles, functions, and script to assign metier to …

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…eflalo data

add feild types and code to create dummy data

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Merge branch 'test-workflow' of https://github.com/ices-eg/wg_WGSFD i…

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…nto test-workflow

added Einar's QC markdown

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merge by area added to assign metier script

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Merge branch 'test-workflow' of https://github.com/ices-eg/wg_WGSFD i…

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…nto test-workflow

added a function that extracts FAO code from a spatial polygon layer

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wrote a wrapper for these few lines

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corrected an object name and removed the unneeded columns from input …

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…data

added the rest of blob/master/Metiers/Scripts/script_metiers.R

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as well as the few lines needed when target species is known

commit latest change in workflow development

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commit all changes in workflow for datacall

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Merge branch 'test-workflow' of https://github.com/ices-eg/wg_WGSFD i…

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…nto test-workflow

changes from Marta in the preprocessing stage

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changes to file structure in the folder

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change when table 1 and table 2 are loaded

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LaraSalvany and others added 30 commits February 18, 2022 12:30

Update Data preparation and submission.md

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index

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headers updated

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Merge branch 'test-workflow' of https://github.com/ices-eg/wg_WGSFD i…

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…nto test-workflow

Update Data preparation and submission.md

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Update README.md

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Test workflow #40

Test workflow #40

josefineegekvist commented Dec 14, 2021

Test workflow #40

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Test workflow #40

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josefineegekvist commented Dec 14, 2021