GitHub - ilveroluca/seal: Hadoop-based toolkit for processing NGS data

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Hadoop-based toolkit for processing NGS data

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Name		Name	Last commit message	Last commit date
Latest commit History 840 Commits
docs		docs
examples		examples
scripts		scripts
seal		seal
src/it/crs4/seal		src/it/crs4/seal
tests		tests
.gitignore		.gitignore
AUTHORS		AUTHORS
COPYING		COPYING
MANIFEST.in		MANIFEST.in
Makefile		Makefile
README.txt		README.txt
build.xml		build.xml
setup.py		setup.py

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==================
Seal
==================


Seal is a suite of distributed applications for aligning short DNA reads, and
manipulating and analyzing short read alignments.  Seal applications generally run on the Hadoop
framework and are made to scale well in the amount of computing nodes available
and the amount of the data to process.  This fact makes Seal particularly well
suited for processing large data sets.

See the documentation at http://biodoop-seal.sourceforge.net/ for more information.


Install
+++++++++++

Please see the Seal documentation at http://biodoop-seal.sourceforge.net/.
Alternatively, if you have Sphinx installed you can make your own local copy
of the documentation::

  make doc

Authors
++++++++++++

Seal was written by:
 * Luca Pireddu <[email protected]>
 * Simone Leo <[email protected]>
 * Gianluigi Zanetti <[email protected]>

Contributors:
 * Guillerma Carrasco Hernandez <[email protected]>
 * Roman Valls Guimera <[email protected]>

License
++++++++

Seal and its components are released under the `GPLv3 license <http://www.gnu.org/licenses/gpl.html>`_.


Copyright
++++++++++

Copyright CRS4, 2011-2012.