[skip vbump], preping for 0.9.4 release

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: tern
 Title: Create Common TLGs Used in Clinical Trials
-Version: 0.9.3.9033
+Version: 0.9.4
 Date: 2024-04-15
 Authors@R: c(
     person("Joe", "Zhu", , "[email protected]", role = c("aut", "cre")),
@@ -25,7 +25,7 @@ URL: https://insightsengineering.github.io/tern/,
 BugReports: https://github.com/insightsengineering/tern/issues
 Depends:
     R (>= 3.6),
-    rtables (>= 0.6.6)
+    rtables (>= 0.6.7)
 Imports:
     broom (>= 0.5.4),
     car (>= 3.0-13),
@@ -34,7 +34,7 @@ Imports:
     dplyr (>= 1.0.0),
     emmeans (>= 1.8.0),
     forcats (>= 1.0.0),
-    formatters (>= 0.5.5),
+    formatters (>= 0.5.6),
     ggplot2 (>= 3.5.0),
     grid,
     gridExtra (>= 2.0.0),

NEWS.md

@@ -1,12 +1,12 @@
-# tern 0.9.3.9033
+# tern 0.9.4
 
 ### New Features
-* Refactored `g_forest` to output a `ggplot` object instead of a `grob` object.
 * Added `h_glm_negbin` to `h_glm_count` to enable count data analysis using a negative binomial model.
 * Added argument `grade_groups_only` to `count_occurrences_by_grade` to allow users to only display rows for specified grade groups.
 * Added internal function `df2gg` that converts `data.frame` objects to `ggplot` objects.
 * Added functions `control_surv_med_annot` and `control_coxph_annot` to configure `g_km` annotation table sizes/positions.
 * Refactored `g_km` to output a `ggplot` object instead of a `grob` object.
+* Refactored `g_forest` to output a `ggplot` object instead of a `grob` object.
 
 ### Enhancements
 * Default format for mean p-values (`mean_pval`) updated from `"xx.xx"` to `"x.xxxx | (<0.0001)"`.
@@ -20,16 +20,16 @@
 
 ### Miscellaneous
 * Added function `expect_snapshot_ggplot` to test setup file to process plot snapshot tests and allow plot dimensions to be set.
-* Began deprecation of the named element `strat`, to be renamed to `strata`, within the `variables` argument to `h_rsp_to_logistic_variables`, `h_logistic_mult_cont_df`, `h_odds_ratio_subgroups_df`, `h_coxreg_mult_cont_df`, `h_coxph_subgroups_df`, `h_tbl_coxph_pairwise`, `extract_rsp_biomarkers`, `extract_rsp_subgroups`, `extract_survival_biomarkers`, and `extract_survival_subgroups`.
-* Began deprecation of the `strat` argument to `s_coxph_pairwise` and replaced it with the `strata` argument.
-* Adapt to argument renames introduced in `ggplot2` 3.5.0.
+* Adapted to argument renames introduced in `ggplot2` 3.5.0.
+* Renamed `individual_patient_plot.R` to `g_ipp.R`. 
 * Removed all instances of deprecated parameters `time_unit_input`, `time_unit_output`, `na_level` and `indent_mod`.
 * Removed deprecated functions `summarize_vars`, `control_summarize_vars`, `a_compare`, `create_afun_summary`, `create_afun_compare`, and `summary_custom`.
+* Removed `vdiffr` package from Suggests in DESCRIPTION file.
+* Began deprecation of the named element `strat`, to be renamed to `strata`, within the `variables` argument to `h_rsp_to_logistic_variables`, `h_logistic_mult_cont_df`, `h_odds_ratio_subgroups_df`, `h_coxreg_mult_cont_df`, `h_coxph_subgroups_df`, `h_tbl_coxph_pairwise`, `extract_rsp_biomarkers`, `extract_rsp_subgroups`, `extract_survival_biomarkers`, and `extract_survival_subgroups`.
+* Began deprecation of the `strat` argument to `s_coxph_pairwise` and replaced it with the `strata` argument.
 * Began deprecation of the `forest_grob`, `forest_dot_line`, `forest_viewport`, `vp_forest_table_part`, and `grid.forest` functions.
 * Began deprecation of no longer used Kaplan-Meier helper functions `h_ggkm`, `h_decompose_gg`, `h_km_layout`, `h_grob_tbl_at_risk`, `h_grob_median_surv`, `h_grob_y_annot`, and `h_grob_coxph`.
 * Began deprecation of `grob`/`grid` related functions `stack_grobs`, `arrange_grobs`, and `draw_grob` which are no longer used in `tern`.
-* Removed `vdiffr` package from Suggests in DESCRIPTION file.
-* Renamed `individual_patient_plot.R` to `g_ipp.R`. 
 
 # tern 0.9.3
 

README.md

@@ -36,7 +36,7 @@ Data visualizations:
 
 Statistical model fit summaries:
 
--   Logistic regression ([`summarize_logistic`](https://insightsengineering.github.io/tern/latest-tag/reference/logistic_regression.html))
+-   Logistic regression ([`summarize_logistic`](https://insightsengineering.github.io/tern/latest-tag/reference/summarize_logistic.html))
 -   Cox regression ([`summarize_coxreg`](https://insightsengineering.github.io/tern/latest-tag/reference/cox_regression.html))
 
 Analysis tables: