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Update snapshots to fix autovalidate tests #986

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Jun 26, 2023
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Update snapshots to fix autovalidate tests #986

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4 changes: 2 additions & 2 deletions tests/testthat/_snaps/estimate_incidence_rate.md
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Original file line number Diff line number Diff line change
Expand Up @@ -9,10 +9,10 @@
$conf_type
[1] "exact"

$time_unit_input
$input_time_unit
[1] "month"

$time_unit_output
$num_pt_year
[1] 100


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2 changes: 1 addition & 1 deletion tests/testthat/_snaps/estimate_proportion.md
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Original file line number Diff line number Diff line change
Expand Up @@ -200,7 +200,7 @@
Output
[,1] [,2] [,3]
[1,] "39.00 (56.52%)" "38.00 (52.05%)" "31.00 (53.45%)"
[2,] "(37.1236, 63.4557)" "(36.5183, 54.7953)" "(33.3127, 57.6543)"
[2,] "(37.1236, 63.4557)" "(35.1170, 57.1709)" "(33.3127, 57.6543)"
[,4]
[1,] "108.00 (54.00%)"
[2,] "(46.8585, 60.2254)"
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72 changes: 72 additions & 0 deletions tests/testthat/_snaps/summarize_coxreg.md
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Original file line number Diff line number Diff line change
Expand Up @@ -33,6 +33,45 @@



# s_coxreg works with character covariates in the univariate case when interaction = TRUE

Code
res
Output
$hr
$hr$`2 vs control (1)`
[1] 0.6386426


$hr
$hr$`A Covariate Label`
numeric(0)

$hr$` 1`
[1] 0.6284569

$hr$` 2`
[1] 0.5806499

$hr$` 3`
[1] 0.5486103

$hr$` 4`
[1] 0.6910725


$hr
$hr$`Sex (F/M)`
numeric(0)

$hr$` F`
[1] 0.6678243

$hr$` M`
[1] 0.5954021



# a_coxreg works as expected

Code
Expand Down Expand Up @@ -185,6 +224,39 @@
Age
All 1.01 (1.00, 1.02) 0.2486

# summarize_coxreg works with character covariate in univariate case when interaction = TRUE

Code
res
Output
n Hazard Ratio 95% CI p-value Interaction p-value
————————————————————————————————————————————————————————————————————————————————————————————————
Treatment:
ARM: 2 vs control (ARM: 1) 340 0.64 (0.43, 0.94) 0.0242
Covariate:
COVAR2 340 0.7759
F 0.67 (0.36, 1.22)
M 0.60 (0.36, 0.99)

---

Code
res
Output
n Hazard Ratio 95% CI p-value Interaction p-value
————————————————————————————————————————————————————————————————————————————————————————————————
Treatment:
ARM: 2 vs control (ARM: 1) 340 0.64 (0.43, 0.94) 0.0242
Covariate:
A Covariate Label 340 0.9883
1 0.63 (0.35, 1.14)
2 0.58 (0.27, 1.26)
3 0.55 (0.22, 1.35)
4 0.69 (0.23, 2.07)
COVAR2 340 0.7759
F 0.67 (0.36, 1.22)
M 0.60 (0.36, 0.99)

# summarize_coxreg adds the multivariate Cox regression layer to rtables

Code
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