Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Create FAQ for the resource #62

Closed
shntnu opened this issue Apr 6, 2023 · 8 comments
Closed

Create FAQ for the resource #62

shntnu opened this issue Apr 6, 2023 · 8 comments

Comments

@shntnu
Copy link
Contributor

shntnu commented Apr 6, 2023

I'll start this thread for collating FAQs. To get started, let's link out to issues that seem like good additions to the FAQ-to-be

@shntnu
Copy link
Contributor Author

shntnu commented Apr 6, 2023

Clarify why some perturbations have many replicates

https://github.com/jump-cellpainting/megamap/issues/8

@shntnu
Copy link
Contributor Author

shntnu commented Mar 15, 2024

Clarify that for some plates, we have images but not anything else downstream. These plates failed QC but we kept them because they may be useful for developing QC methods.

Also clarify that the load_data files are the right way to index into the dataset

#72 (comment)

@shntnu
Copy link
Contributor Author

shntnu commented Mar 29, 2024

@afermg this is the FAQ issue I mentioned during checkin

@afermg
Copy link
Collaborator

afermg commented Mar 29, 2024

@shntnu Is the goal to translate these into an actual FAQ or just to link them?

@shntnu
Copy link
Contributor Author

shntnu commented Mar 29, 2024

@shntnu Is the goal to translate these into an actual FAQ or just to link them?

Translate them to an actual FAQ in the JUMP handbook, then close out this issue because we should track it in that repo instead (via PR's each time there is a new Q). What do you think?

@afermg
Copy link
Collaborator

afermg commented Mar 29, 2024 via email

@afermg
Copy link
Collaborator

afermg commented May 7, 2024

I think this is solved by broad.io/jump. I'll close this issue but LMK if there is anything else to be done.

@afermg afermg closed this as completed May 7, 2024
@shntnu
Copy link
Contributor Author

shntnu commented Jul 15, 2024

I think this is solved by broad.io/jump. I'll close this issue but LMK if there is anything else to be done.

The FAQ itself is currently at this location
https://broadinstitute.github.io/2023_12_JUMP_data_only_vignettes/explanations/FAQ.html

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants