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  1. wiggleplotr wiggleplotr Public

    A small R package to make sequencing read coverage plots in R.

    R 37 19

  2. txrevise txrevise Public

    Construct custom transcript annotations for Salmon

    R 4 4

  3. eQTL-Catalogue/qtlmap eQTL-Catalogue/qtlmap Public

    Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue

    R 45 13

  4. eQTL-Catalogue/susie-workflow eQTL-Catalogue/susie-workflow Public archive

    Nextflow workflow for applying SuSiE finemapping model to a large number of molecular QTLs

    R 8 3

  5. eQTL-Catalogue/qcnorm eQTL-Catalogue/qcnorm Public

    This pipeline will run QC measures of both genotype and phenotype data and will normalise quantified phenotypes

    Nextflow 5 4

  6. eQTL-Catalogue/rnaseq eQTL-Catalogue/rnaseq Public

    RNA-seq quantification pipeline used by the eQTL Catalogue

    Nextflow 5 7