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@krumsieklab

Krumsiek Lab

Krumsiek Lab at Weill Cornell Medicine

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  1. maplet maplet Public

    R statistical toolbox for metabolomics

    R 17 6

  2. mtVAE mtVAE Public

    Variational autoencoders learn universal latent representations of metabolomics data (supplementary code)

    R 11 3

  3. MoDentify MoDentify Public

    Phenotype-driven module identification based on multi-level networks, R package

    R 6 2

  4. CutoffOpt CutoffOpt Public

    Prior-knowledge-based cutoff optimization for correlation networks (supplementary code for doi:10.1038/s41467-020-18675-3)

    R 6 4

  5. MissingValues MissingValues Public

    R code for simulation of incomplete metabolomics data and imputation methods (supplementary code for https://link.springer.com/article/10.1007%2Fs11306-018-1420-2)

    R 4 3

  6. Odefy Odefy Public

    Odefy MATLAB package

    MATLAB 2

Repositories

Showing 10 of 28 repositories
  • aibridge Public
    krumsieklab/aibridge’s past year of commit activity
    Python 0 0 0 0 Updated Oct 26, 2024
  • maplet Public

    R statistical toolbox for metabolomics

    krumsieklab/maplet’s past year of commit activity
    R 17 GPL-3.0 6 72 0 Updated Oct 9, 2024
  • autofocus Public

    Code repository for the AutoFocus project

    krumsieklab/autofocus’s past year of commit activity
    R 1 0 0 0 Updated Sep 6, 2024
  • RAGatouille Public Forked from AnswerDotAI/RAGatouille

    Easily use and train state of the art late-interaction retrieval methods (ColBERT) in any RAG pipeline. Designed for modularity and ease-of-use, backed by research.

    krumsieklab/RAGatouille’s past year of commit activity
    Python 0 Apache-2.0 206 0 0 Updated Aug 19, 2024
  • krumsieklab/prostate-cancer-edrn’s past year of commit activity
    R 1 MIT 0 0 0 Updated Nov 27, 2023
  • krumsieklab/keto-beam-ad’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 24, 2023
  • PRIME Public
    krumsieklab/PRIME’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 16, 2023
  • sgi Public

    SGI: automatic clinical subgroup identification in omics datasets

    krumsieklab/sgi’s past year of commit activity
    R 2 GPL-3.0 1 0 0 Updated Oct 21, 2023
  • krumsieklab/ad-mayo-tauopathies’s past year of commit activity
    R 0 0 0 0 Updated Jul 17, 2023
  • krumsieklab/covid-ards-urine’s past year of commit activity
    R 1 0 0 0 Updated Mar 30, 2023

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