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Validate external, custom SummarizedExperiment objects #135

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KelseyChetnik opened this issue Mar 15, 2021 · 1 comment
Open

Validate external, custom SummarizedExperiment objects #135

KelseyChetnik opened this issue Mar 15, 2021 · 1 comment
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@KelseyChetnik
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In GitLab by @krumsiek on Aug 29, 2020, 14:36

Users of the pipeline might supply their own SummarizedExperiment to a pipeline. We need a function to make sure that it complies with the required internal format.

Aspects to check (list to be extended):

  1. rownames of SummarizedExperiment need to be valid variable names.
@KelseyChetnik
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In GitLab by @krumsiek on Aug 29, 2020, 14:36

changed the description

@KelseyChetnik KelseyChetnik transferred this issue from another repository Mar 15, 2021
@KelseyChetnik KelseyChetnik added the lab priority designated a priority item by one or more members of the lab label Jan 14, 2022
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