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1. cdr_mri cdr_mri Public

   This is the code corresponding to our publication introducing ConvDecoder with physics-based regularization (CD+r) for MRI

   Python 10 2

2. medsam_breastmri medsam_breastmri Public

   Fine-tune the MedSAM model for segmenting ductal carcinoma in situ on DCE-MRI

   Jupyter Notebook

3. sat2nu sat2nu Public

   Sat2Nu, a U-Net architecture, for synthesizing nonfat-suppressed breast MRIs from fat-suppressed inputs.

   Python 1

4. dcis_radiomics dcis_radiomics Public

   MRI-based radiomic features for predicting cases of ductal carcinoma in situ that upstage to invasive disease.

   R

5. radiomics_captk_pipeline radiomics_captk_pipeline Public

   This is a MATLAB wrapper pipeline for executing CaPTk on medical images to extract radiomic features and process them.

   MATLAB 1

6. data_challenge_ophthalmology data_challenge_ophthalmology Public

   A 40 hour data challenge that addresses two concepts with simulated patient data: segmentation of ophthalmic images and association analysis between diabetes and smoking status

   Jupyter Notebook 1