kviljoen / 16S_quick_QC Public

Notifications You must be signed in to change notification settings
Fork 0
Star 2

Just a quick QC test running fastqc and multiqc

2 stars 0 forks Branches Tags Activity

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 23 Commits
conf		conf
README.md		README.md
main.nf		main.nf
nextflow.config		nextflow.config

Repository files navigation

16S_quick_QC

Just a quick QC test running fastqc and multiqc

Typical run on UCT hex: nextflow run kviljoen/16S_quick_QC --rawReads 'raw_testdata/*{R1,R2}.fastq' --outdir /path/to/outdir/ -profile hex

About

Just a quick QC test running fastqc and multiqc

Report repository

Releases

No releases published

Packages

No packages published

Languages

Nextflow 100.0%