Skip to content
Pull request

chore: Remove abandoned Sentinel-1 notebook #878

Sign in to view logs

chore: Remove abandoned Sentinel-1 notebook

chore: Remove abandoned Sentinel-1 notebook #878

Workflow file for this run

.github/workflows/test.yml at c27407f
name: Pull request
on:
pull_request:
types: [opened, reopened, synchronize]
jobs:
lint:
name: Lint content
runs-on: ubuntu-24.04
steps:
- name: Check out repository
uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
with:
fetch-depth: 0 # Enable gitlint to check all PR commit messages
- uses: cachix/install-nix-action@ba0dd844c9180cbf77aa72a116d6fbc515d0e87b # v27
- uses: cachix/cachix-action@ad2ddac53f961de1989924296a1f236fcfbaa4fc # v15
with:
name: linz
authToken: "${{ secrets.CACHIX_AUTH_TOKEN }}"
- name: Cache pre-commit
uses: actions/cache@0c45773b623bea8c8e75f6c82b208c3cf94ea4f9 # v4.0.2
with:
path: ~/.cache/pre-commit
key:
${{ secrets.CACHE_SEED }}-${{ hashFiles('.pre-commit-config.yaml')
}}
- name: Run pre-commit hooks
run: nix-shell --pure --run 'pre-commit run --all-files'
- name: Check all commit messages in Pull Request
run:
nix-shell --pure --run 'gitlint --commits origin/${{ github.base_ref
}}..${{ github.event.pull_request.head.sha }}'
test-machine-readable-to-human-readable-date-time:
name: Test machine readable to human-readable date/time using Nix
runs-on: ubuntu-24.04
defaults:
run:
working-directory: machine-readable-to-human-readable-date-time
steps:
- name: Check out repository
uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
- uses: cachix/install-nix-action@ba0dd844c9180cbf77aa72a116d6fbc515d0e87b # v27
- uses: cachix/cachix-action@ad2ddac53f961de1989924296a1f236fcfbaa4fc # v15
with:
name: linz
authToken: "${{ secrets.CACHIX_AUTH_TOKEN }}"
- name: Run test
run: nix-shell --pure --run 'LC_MESSAGES=C TZ=UTC mocha'
test-sentinel-2-water-extraction-nix:
name: Test Sentinel-2 using Nix
runs-on: ubuntu-24.04
defaults:
run:
working-directory: flooding/sentinel2_water_extraction
steps:
- name: Check out repository
uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
- uses: cachix/install-nix-action@ba0dd844c9180cbf77aa72a116d6fbc515d0e87b # v27
- uses: cachix/cachix-action@ad2ddac53f961de1989924296a1f236fcfbaa4fc # v15
with:
name: linz
authToken: "${{ secrets.CACHIX_AUTH_TOKEN }}"
- name: Run test
run:
nix-shell --pure --run 'jupyter nbconvert --debug --execute --inplace
--to=notebook sentinel2_water_extraction.ipynb'
test-sentinel-2-water-extraction-poetry:
name:
Test Sentinel-2 on ${{ matrix.runner }}, using Poetry with Python ${{
matrix.python }}
runs-on: ${{ matrix.runner }}
defaults:
run:
shell: bash --login -o errexit {0} # https://github.com/conda-incubator/setup-miniconda/tree/7e642bb2e4ca56ff706818a0febf72bb226d348d#use-a-default-shell
working-directory: flooding/sentinel2_water_extraction
strategy:
fail-fast: false
matrix:
runner:
- macos-12
- ubuntu-22.04
- ubuntu-24.04
- windows-2022
python:
- "3.9"
- "3.11"
include:
- runner: macos-12
pip-cache-dir: ~/Library/Caches/pip
- runner: ubuntu-22.04
pip-cache-dir: ~/.cache/pip
- runner: ubuntu-24.04
pip-cache-dir: ~/.cache/pip
- runner: windows-2022
pip-cache-dir: ~\AppData\Local\pip\Cache
steps:
- name: Check out repository
uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
- name: Cache pip packages
uses: actions/cache@0c45773b623bea8c8e75f6c82b208c3cf94ea4f9 # v4.0.2
with:
path: ${{ matrix.pip-cache-dir }}
key:
${{ runner.os }}-pip-${{ secrets.CACHE_SEED }}-${{ matrix.python
}}-${{
hashFiles('./flooding/sentinel2_water_extraction/poetry.lock') }}
restore-keys:
${{ runner.os }}-pip-${{ secrets.CACHE_SEED }}-${{ matrix.python }}
- name: Cache Conda packages
uses: actions/cache@0c45773b623bea8c8e75f6c82b208c3cf94ea4f9 # v4.0.2
with:
path: ~/conda_pkgs_dir
key:
${{ runner.os }}-conda-${{ secrets.CACHE_SEED }}-${{ matrix.python
}}
- name: Get GDAL Python package version
run: |
GDAL_VERSION="$(grep --max-count=1 --only-matching 'file = "GDAL-.*\.tar\.gz"' poetry.lock)"
# Use character removal compatible with macOS 12
GDAL_VERSION="${GDAL_VERSION#?????????????}"
GDAL_VERSION="${GDAL_VERSION%????????}"
echo "GDAL_VERSION=$GDAL_VERSION" >> $GITHUB_ENV
- name: Setup Conda
uses: conda-incubator/setup-miniconda@a4260408e20b96e80095f42ff7f1a15b27dd94ca # v3.0.4
with:
channels: conda-forge
python-version: ${{ matrix.python }}
- name: Install GDAL
run:
conda install --channel=conda-forge --quiet --yes gdal=${{
env.GDAL_VERSION }}
- name: Install Poetry
run: pipx install poetry==1.8.3
- name: Install Python packages on non-Windows runner
run: poetry install --only=main --no-root
if: ${{ !startsWith(runner.os, 'Windows') }}
- name:
Install Python packages on Windows runner (Workaround for
https://github.com/python-poetry/poetry/issues/1031)
uses: nick-fields/retry@7152eba30c6575329ac0576536151aca5a72780e # v3.0.0
with:
timeout_minutes: 9999 # Workaround for https://github.com/nick-fields/retry/issues/107
max_attempts: 6
command: bash --login -o errexit -c 'cd
flooding/sentinel2_water_extraction && poetry install --only=main
--no-root' # Workaround for https://github.com/python-poetry/poetry/issues/7363 / https://github.com/nick-fields/retry/issues/89
shell: bash
if: ${{ startsWith(runner.os, 'Windows') }}
- name: Run test
run:
poetry run jupyter nbconvert --debug --execute --inplace --to=notebook
sentinel2_water_extraction.ipynb
finalise:
if: always()
needs:
- lint
- test-machine-readable-to-human-readable-date-time
- test-sentinel-2-water-extraction-nix
- test-sentinel-2-water-extraction-poetry
runs-on: ubuntu-24.04
steps:
- name: Decide whether the needed jobs succeeded or failed
uses: re-actors/alls-green@05ac9388f0aebcb5727afa17fcccfecd6f8ec5fe # v1.2.2
with:
jobs: ${{ toJSON(needs) }}