Add JNI-based BLAS, LAPACK, and ARPACK implementations #1
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Since java or native can mean more things, let's just log it out.
The former is faster because it doesn't require to copy memory from the heap to native memory
Still without using any external library.
…las.VectorBLAS This aligns with dev.ludovic.netlib.blas.ForeignLinkerBLAS
…etlib.blas.VectorBLAS
I still need to come up with proper testing.
It's now supported with JNIBLAS, JNILAPACK, and (upcoming) JNIARPACK.
It triggered the "Vector API breaks JNI". Turns out testing just got better and uncovered a bug.
jacoco wouldn't setup the argLine variable. Just set it to ""
It's because it doesn't know Throw never returns
2 tasks
It makes it much much easier to manager
luhenry
changed the title
srowen
pushed a commit
to apache/spark
that referenced
this pull request
May 12, 2021
…ic.netlib:2.0 ### What changes were proposed in this pull request? Bump to `dev.ludovic.netlib:2.0` which provides JNI-based wrappers for BLAS, ARPACK, and LAPACK. Theseare not taking dependencies on GPL or LGPL libraries, allowing to provide out-of-the-box support for hardware acceleration when a native library is present (this is still up to the end-user to install such library on their system, like OpenBLAS, Intel MKL, and libarpack2). ### Why are the changes needed? Great performance improvement for ML-related workload on vanilla-distributions of Spark. ### Does this PR introduce _any_ user-facing change? Users now take advantage of hardware acceleration as long as a native library is installed (like OpenBLAS, Intel MKL and libarpack2). ### How was this patch tested? Spark test-suite + dev.ludovic.netlib testsuite. #### JDK8: ``` [info] OpenJDK 64-Bit Server VM 1.8.0_292-b10 on Linux 5.8.0-50-generic [info] Intel(R) Xeon(R) E-2276G CPU 3.80GHz [info] [info] f2jBLAS = dev.ludovic.netlib.blas.F2jBLAS [info] javaBLAS = dev.ludovic.netlib.blas.Java8BLAS [info] nativeBLAS = dev.ludovic.netlib.blas.JNIBLAS [info] [info] daxpy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 220 226 6 454.9 2.2 1.0X [info] java 221 228 5 451.9 2.2 1.0X [info] native 209 215 5 478.7 2.1 1.1X [info] [info] saxpy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 121 125 3 823.3 1.2 1.0X [info] java 121 125 3 824.3 1.2 1.0X [info] native 101 105 3 988.4 1.0 1.2X [info] [info] dcopy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 212 219 6 470.9 2.1 1.0X [info] java 208 212 4 481.0 2.1 1.0X [info] native 209 215 5 478.5 2.1 1.0X [info] [info] scopy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 114 119 3 878.9 1.1 1.0X [info] java 99 105 3 1011.4 1.0 1.2X [info] native 97 103 3 1026.7 1.0 1.2X [info] [info] ddot: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 108 111 2 925.9 1.1 1.0X [info] java 71 73 2 1414.9 0.7 1.5X [info] native 54 56 2 1847.0 0.5 2.0X [info] [info] sdot: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 96 97 2 1046.8 1.0 1.0X [info] java 47 48 1 2129.8 0.5 2.0X [info] native 29 30 1 3404.7 0.3 3.3X [info] [info] dnrm2: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 139 143 2 718.2 1.4 1.0X [info] java 46 47 1 2171.2 0.5 3.0X [info] native 44 46 2 2261.8 0.4 3.1X [info] [info] snrm2: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 154 157 4 651.0 1.5 1.0X [info] java 40 42 1 2469.3 0.4 3.8X [info] native 26 27 1 3787.6 0.3 5.8X [info] [info] dscal: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 185 195 8 541.0 1.8 1.0X [info] java 186 196 7 538.5 1.9 1.0X [info] native 177 187 7 564.1 1.8 1.0X [info] [info] sscal: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 98 102 3 1016.2 1.0 1.0X [info] java 98 102 3 1017.8 1.0 1.0X [info] native 87 91 3 1143.2 0.9 1.1X [info] [info] dgemv[N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 68 70 1 1474.7 0.7 1.0X [info] java 51 52 1 1973.0 0.5 1.3X [info] native 30 32 1 3298.8 0.3 2.2X [info] [info] dgemv[T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 96 99 2 1037.9 1.0 1.0X [info] java 50 51 1 1999.6 0.5 1.9X [info] native 30 31 1 3368.1 0.3 3.2X [info] [info] sgemv[N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 59 61 1 1688.7 0.6 1.0X [info] java 41 42 1 2461.9 0.4 1.5X [info] native 15 16 1 6593.0 0.2 3.9X [info] [info] sgemv[T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 90 92 1 1116.2 0.9 1.0X [info] java 39 40 1 2565.8 0.4 2.3X [info] native 15 16 1 6594.2 0.2 5.9X [info] [info] dger: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 192 202 7 520.5 1.9 1.0X [info] java 203 214 7 491.9 2.0 0.9X [info] native 176 187 7 568.8 1.8 1.1X [info] [info] dspmv[U]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 59 61 1 846.1 1.2 1.0X [info] java 38 39 1 1313.5 0.8 1.6X [info] native 24 27 1 2047.8 0.5 2.4X [info] [info] dspr[U]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 97 101 3 515.4 1.9 1.0X [info] java 97 101 2 515.1 1.9 1.0X [info] native 88 91 3 569.1 1.8 1.1X [info] [info] dsyr[U]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 169 174 3 295.4 3.4 1.0X [info] java 169 174 3 295.4 3.4 1.0X [info] native 160 165 4 312.2 3.2 1.1X [info] [info] dgemm[N,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 561 577 13 1782.3 0.6 1.0X [info] java 225 231 4 4446.2 0.2 2.5X [info] native 31 32 3 32473.1 0.0 18.2X [info] [info] dgemm[N,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 570 584 9 1754.8 0.6 1.0X [info] java 224 230 4 4457.3 0.2 2.5X [info] native 31 32 1 32493.4 0.0 18.5X [info] [info] dgemm[T,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 855 866 6 1169.2 0.9 1.0X [info] java 224 228 3 4466.9 0.2 3.8X [info] native 31 32 1 32395.5 0.0 27.7X [info] [info] dgemm[T,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 1328 1344 8 752.8 1.3 1.0X [info] java 224 230 4 4458.9 0.2 5.9X [info] native 31 32 1 32201.8 0.0 42.8X [info] [info] sgemm[N,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 534 541 5 1873.0 0.5 1.0X [info] java 220 224 3 4542.8 0.2 2.4X [info] native 15 16 1 66803.1 0.0 35.7X [info] [info] sgemm[N,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 544 551 6 1839.6 0.5 1.0X [info] java 220 224 4 4538.2 0.2 2.5X [info] native 15 16 1 65589.9 0.0 35.7X [info] [info] sgemm[T,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 833 845 21 1201.0 0.8 1.0X [info] java 220 224 3 4548.7 0.2 3.8X [info] native 15 16 1 66603.2 0.0 55.5X [info] [info] sgemm[T,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 899 907 5 1112.9 0.9 1.0X [info] java 221 224 2 4531.6 0.2 4.1X [info] native 15 16 1 65944.9 0.0 59.3X ``` #### JDK11: ``` [info] OpenJDK 64-Bit Server VM 11.0.11+9-LTS on Linux 5.8.0-50-generic [info] Intel(R) Xeon(R) E-2276G CPU 3.80GHz [info] [info] f2jBLAS = dev.ludovic.netlib.blas.F2jBLAS [info] javaBLAS = dev.ludovic.netlib.blas.Java11BLAS [info] nativeBLAS = dev.ludovic.netlib.blas.JNIBLAS [info] [info] daxpy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 195 200 3 512.2 2.0 1.0X [info] java 197 202 3 507.0 2.0 1.0X [info] native 184 189 4 543.0 1.8 1.1X [info] [info] saxpy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 108 112 3 921.8 1.1 1.0X [info] java 101 105 3 989.4 1.0 1.1X [info] native 87 91 3 1147.1 0.9 1.2X [info] [info] dcopy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 187 191 3 535.1 1.9 1.0X [info] java 182 188 3 548.8 1.8 1.0X [info] native 178 182 3 562.2 1.8 1.1X [info] [info] scopy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 110 114 3 909.3 1.1 1.0X [info] java 86 93 4 1159.3 0.9 1.3X [info] native 86 90 3 1162.4 0.9 1.3X [info] [info] ddot: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 106 108 2 943.6 1.1 1.0X [info] java 70 71 2 1426.8 0.7 1.5X [info] native 54 56 2 1835.4 0.5 1.9X [info] [info] sdot: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 96 97 1 1047.1 1.0 1.0X [info] java 43 44 1 2331.9 0.4 2.2X [info] native 29 30 1 3392.1 0.3 3.2X [info] [info] dnrm2: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 114 115 2 880.7 1.1 1.0X [info] java 42 43 1 2398.1 0.4 2.7X [info] native 45 46 1 2233.3 0.4 2.5X [info] [info] snrm2: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 140 143 2 714.6 1.4 1.0X [info] java 28 29 1 3531.0 0.3 4.9X [info] native 26 27 1 3820.0 0.3 5.3X [info] [info] dscal: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 156 166 7 641.3 1.6 1.0X [info] java 158 167 6 633.2 1.6 1.0X [info] native 150 160 7 664.8 1.5 1.0X [info] [info] sscal: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 85 88 2 1181.7 0.8 1.0X [info] java 85 88 2 1176.0 0.9 1.0X [info] native 75 78 2 1333.2 0.8 1.1X [info] [info] dgemv[N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 58 59 1 1731.1 0.6 1.0X [info] java 41 43 1 2415.5 0.4 1.4X [info] native 30 31 1 3293.9 0.3 1.9X [info] [info] dgemv[T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 94 96 1 1063.4 0.9 1.0X [info] java 41 42 1 2435.8 0.4 2.3X [info] native 30 30 1 3379.8 0.3 3.2X [info] [info] sgemv[N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 44 45 1 2278.9 0.4 1.0X [info] java 37 38 0 2686.8 0.4 1.2X [info] native 15 16 1 6555.4 0.2 2.9X [info] [info] sgemv[T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 88 89 1 1142.1 0.9 1.0X [info] java 33 34 1 3010.7 0.3 2.6X [info] native 15 16 1 6553.9 0.2 5.7X [info] [info] dger: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 164 172 4 609.4 1.6 1.0X [info] java 163 172 5 612.6 1.6 1.0X [info] native 150 159 4 667.0 1.5 1.1X [info] [info] dspmv[U]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 49 50 1 1029.4 1.0 1.0X [info] java 41 42 1 1209.4 0.8 1.2X [info] native 25 27 1 2029.2 0.5 2.0X [info] [info] dspr[U]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 80 85 3 622.2 1.6 1.0X [info] java 80 85 3 622.4 1.6 1.0X [info] native 75 79 3 668.7 1.5 1.1X [info] [info] dsyr[U]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 137 142 3 364.1 2.7 1.0X [info] java 139 142 2 360.4 2.8 1.0X [info] native 131 135 3 380.4 2.6 1.0X [info] [info] dgemm[N,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 517 525 5 1935.5 0.5 1.0X [info] java 213 216 3 4704.8 0.2 2.4X [info] native 31 31 1 32705.6 0.0 16.9X [info] [info] dgemm[N,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 589 601 6 1698.6 0.6 1.0X [info] java 213 217 3 4693.3 0.2 2.8X [info] native 31 32 1 32498.9 0.0 19.1X [info] [info] dgemm[T,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 851 865 6 1175.3 0.9 1.0X [info] java 212 216 3 4717.0 0.2 4.0X [info] native 30 32 1 32903.0 0.0 28.0X [info] [info] dgemm[T,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 1301 1316 6 768.4 1.3 1.0X [info] java 212 216 2 4717.4 0.2 6.1X [info] native 31 32 1 32606.0 0.0 42.4X [info] [info] sgemm[N,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 454 460 2 2203.0 0.5 1.0X [info] java 208 212 3 4803.8 0.2 2.2X [info] native 15 16 0 66586.0 0.0 30.2X [info] [info] sgemm[N,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 529 536 4 1889.7 0.5 1.0X [info] java 208 212 3 4798.6 0.2 2.5X [info] native 15 16 1 66751.4 0.0 35.3X [info] [info] sgemm[T,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 830 840 5 1205.1 0.8 1.0X [info] java 208 211 2 4814.1 0.2 4.0X [info] native 15 15 1 67676.4 0.0 56.2X [info] [info] sgemm[T,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 894 907 7 1118.7 0.9 1.0X [info] java 208 211 3 4809.6 0.2 4.3X [info] native 15 16 1 66675.2 0.0 59.6X ``` #### JDK16: ``` [info] OpenJDK 64-Bit Server VM 16+36 on Linux 5.8.0-50-generic [info] Intel(R) Xeon(R) E-2276G CPU 3.80GHz [info] [info] f2jBLAS = dev.ludovic.netlib.blas.F2jBLAS [info] javaBLAS = dev.ludovic.netlib.blas.VectorBLAS [info] nativeBLAS = dev.ludovic.netlib.blas.JNIBLAS [info] [info] daxpy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 193 199 3 517.5 1.9 1.0X [info] java 181 186 4 553.2 1.8 1.1X [info] native 181 185 5 553.6 1.8 1.1X [info] [info] saxpy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 108 112 2 925.1 1.1 1.0X [info] java 88 91 3 1138.6 0.9 1.2X [info] native 87 91 3 1144.2 0.9 1.2X [info] [info] dcopy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 184 189 3 542.5 1.8 1.0X [info] java 181 185 3 552.8 1.8 1.0X [info] native 179 183 2 558.0 1.8 1.0X [info] [info] scopy: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 97 101 3 1031.6 1.0 1.0X [info] java 86 90 2 1163.7 0.9 1.1X [info] native 85 88 2 1182.9 0.8 1.1X [info] [info] ddot: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 107 109 2 932.4 1.1 1.0X [info] java 54 56 2 1846.7 0.5 2.0X [info] native 54 56 2 1846.7 0.5 2.0X [info] [info] sdot: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 96 97 1 1043.6 1.0 1.0X [info] java 29 30 1 3439.3 0.3 3.3X [info] native 29 30 1 3423.9 0.3 3.3X [info] [info] dnrm2: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 121 123 2 829.8 1.2 1.0X [info] java 32 32 1 3171.3 0.3 3.8X [info] native 45 46 1 2246.2 0.4 2.7X [info] [info] snrm2: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 142 144 2 705.9 1.4 1.0X [info] java 15 16 1 6585.8 0.2 9.3X [info] native 26 27 1 3839.5 0.3 5.4X [info] [info] dscal: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 157 165 5 635.6 1.6 1.0X [info] java 151 159 5 664.0 1.5 1.0X [info] native 151 160 5 663.6 1.5 1.0X [info] [info] sscal: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 85 89 2 1172.3 0.9 1.0X [info] java 75 79 3 1337.3 0.7 1.1X [info] native 75 79 2 1335.5 0.7 1.1X [info] [info] dgemv[N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 58 59 1 1731.5 0.6 1.0X [info] java 28 29 1 3544.2 0.3 2.0X [info] native 30 31 1 3306.2 0.3 1.9X [info] [info] dgemv[T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 90 92 1 1108.3 0.9 1.0X [info] java 28 28 1 3622.5 0.3 3.3X [info] native 30 31 1 3381.3 0.3 3.1X [info] [info] sgemv[N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 44 45 1 2284.7 0.4 1.0X [info] java 14 15 1 7034.0 0.1 3.1X [info] native 15 16 1 6643.7 0.2 2.9X [info] [info] sgemv[T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 85 86 1 1177.4 0.8 1.0X [info] java 15 15 1 6886.1 0.1 5.8X [info] native 15 16 1 6560.1 0.2 5.6X [info] [info] dger: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 164 173 6 608.1 1.6 1.0X [info] java 148 157 5 675.2 1.5 1.1X [info] native 152 160 5 659.9 1.5 1.1X [info] [info] dspmv[U]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 61 63 1 815.4 1.2 1.0X [info] java 16 17 1 3104.3 0.3 3.8X [info] native 24 27 1 2071.9 0.5 2.5X [info] [info] dspr[U]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 81 85 2 616.4 1.6 1.0X [info] java 81 85 2 614.7 1.6 1.0X [info] native 75 78 2 669.5 1.5 1.1X [info] [info] dsyr[U]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 138 141 3 362.7 2.8 1.0X [info] java 137 140 2 365.3 2.7 1.0X [info] native 131 134 2 382.9 2.6 1.1X [info] [info] dgemm[N,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 525 544 8 1906.2 0.5 1.0X [info] java 61 68 3 16358.1 0.1 8.6X [info] native 31 32 1 32623.7 0.0 17.1X [info] [info] dgemm[N,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 580 598 12 1724.5 0.6 1.0X [info] java 61 68 4 16302.5 0.1 9.5X [info] native 30 32 1 32962.8 0.0 19.1X [info] [info] dgemm[T,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 829 838 4 1206.2 0.8 1.0X [info] java 61 69 3 16339.7 0.1 13.5X [info] native 30 31 1 33231.9 0.0 27.6X [info] [info] dgemm[T,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 1352 1363 5 739.6 1.4 1.0X [info] java 61 69 3 16347.0 0.1 22.1X [info] native 31 32 1 32740.3 0.0 44.3X [info] [info] sgemm[N,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 482 493 7 2073.1 0.5 1.0X [info] java 35 38 2 28315.3 0.0 13.7X [info] native 15 15 1 67579.7 0.0 32.6X [info] [info] sgemm[N,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 472 482 4 2119.0 0.5 1.0X [info] java 36 38 2 28138.1 0.0 13.3X [info] native 15 16 1 66616.5 0.0 31.4X [info] [info] sgemm[T,N]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 823 830 5 1215.2 0.8 1.0X [info] java 35 38 2 28681.4 0.0 23.6X [info] native 15 15 1 67908.4 0.0 55.9X [info] [info] sgemm[T,T]: Best Time(ms) Avg Time(ms) Stdev(ms) Rate(M/s) Per Row(ns) Relative [info] ----------------------------------------------------------------------------------------------- [info] f2j 896 908 7 1115.8 0.9 1.0X [info] java 35 38 2 28402.0 0.0 25.5X [info] native 15 16 0 66691.2 0.0 59.8X ``` TODO: - [x] update documentation in `docs/` and `docs/ml-linalg-guide.md` refering `com.github.fommil.netlib` - [ ] merge luhenry/netlib#1 with all feedback from this PR + remove references to snapshot repositories in `pom.xml` and `project/SparkBuild.scala`. Closes #32415 from luhenry/master. Authored-by: Ludovic Henry <[email protected]> Signed-off-by: Sean Owen <[email protected]>
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It effectively completely replace
com.github.fommil.netlib:coreandcom.github.fommil.netlib:allbut without any other dependencies.