Add manuscript SVM_test.docx for revision #446
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Manubot | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| pull_request: | |
| branches: | |
| - main | |
| - master | |
| # NOTE: scheduled workflows are supported as of 2022-09-27 (example commented below) | |
| # https://github.com/community/community/discussions/12269#discussioncomment-3747667 | |
| # scheduled: | |
| # - cron: '40 10 1 * *' # https://crontab.guru/#40_10_1_*_* | |
| workflow_dispatch: | |
| inputs: | |
| BUILD_PDF: | |
| type: boolean | |
| description: generate PDF output | |
| default: true | |
| BUILD_DOCX: | |
| type: boolean | |
| description: generate DOCX output | |
| default: false | |
| BUILD_LATEX: | |
| type: boolean | |
| description: generate LaTeX output | |
| default: false | |
| SPELLCHECK: | |
| type: boolean | |
| description: Check spelling | |
| default: true | |
| MANUBOT_USE_DOCKER: | |
| type: boolean | |
| description: Use Docker to generate PDF | |
| default: true | |
| jobs: | |
| manubot: | |
| name: Manubot | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| env: | |
| GITHUB_PULL_REQUEST_SHA: ${{ github.event.pull_request.head.sha }} | |
| # Set SPELLCHECK to true/false for whether to check spelling in this action. | |
| # For workflow dispatch jobs, this SPELLCHECK setting will be overridden by the user input. | |
| SPELLCHECK: true | |
| defaults: | |
| run: | |
| shell: bash --login {0} | |
| steps: | |
| - name: Checkout Repository | |
| uses: actions/checkout@v4 | |
| with: | |
| # fetch entire commit history to support get_rootstock_commit | |
| fetch-depth: 0 | |
| - name: Set Environment Variables (Workflow Dispatch) | |
| if: github.event_name == 'workflow_dispatch' | |
| run: | | |
| echo "BUILD_PDF=${{ github.event.inputs.BUILD_PDF }}" >> $GITHUB_ENV | |
| echo "BUILD_DOCX=${{ github.event.inputs.BUILD_DOCX }}" >> $GITHUB_ENV | |
| echo "BUILD_LATEX=${{ github.event.inputs.BUILD_LATEX }}" >> $GITHUB_ENV | |
| echo "SPELLCHECK=${{ github.event.inputs.SPELLCHECK }}" >> $GITHUB_ENV | |
| echo "MANUBOT_USE_DOCKER=${{ github.event.inputs.MANUBOT_USE_DOCKER }}" >> $GITHUB_ENV | |
| - name: Set Environment Variables | |
| run: | | |
| TRIGGERING_SHA=${GITHUB_PULL_REQUEST_SHA:-$GITHUB_SHA} | |
| echo "TRIGGERING_SHA_7=${TRIGGERING_SHA::7}" >> $GITHUB_ENV | |
| echo "TRIGGERING_SHA: $TRIGGERING_SHA" | |
| DEFAULT_BRANCH=${{ github.event.repository.default_branch }} | |
| echo "DEFAULT_BRANCH=${DEFAULT_BRANCH}" >> $GITHUB_ENV | |
| echo "DEFAULT_BRANCH_REF=refs/heads/$DEFAULT_BRANCH" >> $GITHUB_ENV | |
| echo "DEFAULT_BRANCH=$DEFAULT_BRANCH" | |
| - name: Cache | |
| uses: actions/cache@v4 | |
| with: | |
| path: ci/cache | |
| key: ci-cache-${{ github.ref }} | |
| restore-keys: | | |
| ci-cache-${{ env.DEFAULT_BRANCH_REF }} | |
| - name: Install Environment | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| activate-environment: manubot | |
| environment-file: build/environment.yml | |
| auto-activate-base: false | |
| miniforge-variant: Mambaforge | |
| miniforge-version: 'latest' | |
| use-mamba: true | |
| - name: Install Spellcheck | |
| if: env.SPELLCHECK == 'true' | |
| run: bash ci/install-spellcheck.sh | |
| - name: Build Manuscript | |
| run: bash build/build.sh | |
| - name: Upload Artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: manuscript-${{ github.run_id }}-${{ env.TRIGGERING_SHA_7 }} | |
| path: output | |
| - name: Deploy Manuscript | |
| if: github.ref == env.DEFAULT_BRANCH_REF && github.event_name != 'pull_request' && !github.event.repository.fork | |
| env: | |
| MANUBOT_ACCESS_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| MANUBOT_SSH_PRIVATE_KEY: ${{ secrets.MANUBOT_SSH_PRIVATE_KEY }} | |
| CI_BUILD_WEB_URL: https://github.com/${{ github.repository }}/commit/${{ github.sha }}/checks | |
| CI_JOB_WEB_URL: https://github.com/${{ github.repository }}/actions/runs/${{ github.run_id }} | |
| run: bash ci/deploy.sh |