Make sure pak includes "LinkingTo" dependencies to avoid rsconnect er… #356
Workflow file for this run
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| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| # Name of the workflow => usethis::use_github_actions_badge("CI-CD") | |
| name: CI-CD | |
| on: | |
| # Triggered on push and pull request events | |
| push: | |
| pull_request: | |
| # Allow manual runs from the Actions tab | |
| workflow_dispatch: | |
| # Monthly runs on the 1st day of the month at midnight | |
| # (specific for ShinyCICD maintenance) | |
| schedule: | |
| - cron: '0 0 1 * *' | |
| # Avoid concurrent deployments from both workflows by running one at a time | |
| # (specific for ShinyCICD maintenance) | |
| concurrency: | |
| group: shinyapps-${{ github.ref }} | |
| jobs: | |
| CI-CD: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| # We keep a matrix for convenience, but we would typically just run on one | |
| # single OS and R version, aligned with the target deployment environment | |
| matrix: | |
| config: | |
| - {os: ubuntu-latest, r: 'release'} | |
| env: | |
| # Access token for GitHub | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| # Preserve package sources for informative references in case of errors | |
| R_KEEP_PKG_SOURCE: yes | |
| # rsconnect needs transitive LinkingTo-only dependencies to be installed | |
| # (see https://github.com/r-lib/pak/issues/485) | |
| PKG_INCLUDE_LINKINGTO: true | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| # Enable RStudio Package Manager to speed up package installation | |
| use-public-rspm: true | |
| - name: Install and cache dependencies | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck | |
| - name: Check package | |
| uses: r-lib/actions/check-r-package@v2 | |
| - name: Deploy to shinyapps.io | |
| # Continuous deployment only for pushes to the main / master branch | |
| if: github.ref == 'refs/heads/main' || github.ref == 'refs/heads/master' | |
| env: | |
| SHINYAPPS_ACCOUNT: ${{ secrets.SHINYAPPS_ACCOUNT }} | |
| SHINYAPPS_TOKEN: ${{ secrets.SHINYAPPS_TOKEN }} | |
| SHINYAPPS_SECRET: ${{ secrets.SHINYAPPS_SECRET }} | |
| run: Rscript deploy/deploy-shinyapps.R |