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62 z ale remapping #188

Merged
merged 12 commits into from
Jun 15, 2015
Merged

62 z ale remapping #188

merged 12 commits into from
Jun 15, 2015

Commits on Jun 4, 2015

  1. Split Zstar grid creation up so can be done column-by-column. mom-oce… 

    …an#62
    @nichannah
    nichannah committed Jun 4, 2015
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  2. Fix output from remapping conservation check. mom-ocean#62

    @nichannah
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  3. Only initialise diag_mediator after h and G have been set up. mom-oce… 

    …an#62
    @nichannah
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  4. Disable old Z space diagnostic remapping for tracers. Will eventually… 

    … be removed. mom-ocean#62
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  5. Create diag variation that remaps T+layer diagnostics automatically. m… 

    …om-ocean#62
    @nichannah
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  6. Reduce the minimum regridding thickness. Necessary for conservation when 

    there are many thin layers. mom-ocean#62
    @nichannah
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  7. Set the minimum layer thickness for remapping only. mom-ocean#62

    @nichannah
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Commits on Jun 5, 2015

  1. Don't move call to diag_mediator_init, setup pointer to H with setter… 

    … method. mom-ocean#62
    @nichannah
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  2. Remove unnecessary addition of optional arguments. mom-ocean#62

    @nichannah
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  3. Change name of ALE remapped Z level diagnostics to have _z_new suffix… 

    …, avoids conflict with existing Z level diagnostics. mom-ocean#62
    @nichannah
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  4. Remove unnecessary include. mom-ocean#62

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  5. Improve specification of grid definition file,variable used for 

    diagnostic remapping. The format is now:
        DIAG_REMAP_Z_GRID_DEF = "FILE:OM3_zgrid.nc,zw"

Also use library to read netCDF files. mom-ocean#62
    @nichannah
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