fix bug in removemissing; add S4 methods for verUnsharedFeature; Upda… #68
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# This workflow uses actions that are not certified by GitHub. | |
# They are provided by a third-party and are governed by | |
# separate terms of service, privacy policy, and support | |
# documentation. | |
# | |
# See https://github.com/r-lib/actions/tree/master/examples#readme for | |
# additional example workflows available for the R community. | |
name: R | |
on: | |
push: | |
branches: [ "master", "newObj" ] | |
pull_request: | |
branches: [ "master", "newObj" ] | |
permissions: | |
contents: read | |
jobs: | |
build: | |
runs-on: ${{ matrix.config.os }} | |
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: macOS-latest, r: 'release'} | |
- {os: windows-latest, r: 'release'} | |
- {os: ubuntu-latest, r: 'release'} | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up R ${{ matrix.r }} | |
uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
http-user-agent: ${{ matrix.config.http-user-agent }} | |
use-public-rspm: true | |
- name: Install library on Linux | |
if: runner.os == 'Linux' | |
run: | | |
sudo apt-get install libhdf5-dev | |
sudo apt-get install libglpk-dev | |
- name: Install dependencies | |
run: | | |
install.packages(c("remotes", "rcmdcheck", "covr")) | |
remotes::install_deps(dependencies = TRUE) | |
shell: Rscript {0} | |
- name: Check | |
run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning") | |
shell: Rscript {0} | |
- name: Run codecov | |
run: | | |
covr::codecov() | |
shell: Rscript {0} | |
- name: Upload coverage reports to Codecov | |
uses: codecov/codecov-action@v3 | |