Set numpy and scipy as direct dependencies

These are currently installed as dependencies of dependencies. Since they are directly imported in this codebase, they should be direct dependencies with pinned versions.
nextstrain · Jan 3, 2023 · dd7381e · dd7381e
1 parent f8f15ff
commit dd7381e
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/setup.py b/setup.py
@@ -57,10 +57,12 @@
         "isodate ==0.6.*",
         "jsonschema >=3.0.0, ==3.*",
         "networkx >= 2.5, ==2.*",
+        "numpy ==1.*",
         "packaging >=19.2",
         "pandas >=1.0.0, ==1.*",
         "phylo-treetime >=0.9.3, ==0.9.*",
         "pyfastx >=0.8.4, ==0.8.*",
+        "scipy ==1.9.*",
         "xopen[zstd] >=1.7.0, ==1.*"
     ],
     extras_require = {