Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Dispersion Application Definition #1238

Closed
wants to merge 80 commits into from
Closed

Dispersion Application Definition #1238

wants to merge 80 commits into from

Commits on Jan 27, 2022

  1. Added EM and APM base_classes and MPES, EM, APM, Ellips application d… 

    …efinitions
    @sherjeelshabih
    sherjeelshabih committed Jan 27, 2022
    Configuration menu
    Copy the full SHA
    6f4d371 View commit details
    Browse the repository at this point in the history

  2. Removed not needed Application definitions for now

    @sherjeelshabih
    sherjeelshabih committed Jan 27, 2022
    Configuration menu
    Copy the full SHA
    0fc141a View commit details
    Browse the repository at this point in the history

  3. Added required base_class by MPES reader

    @sherjeelshabih
    sherjeelshabih committed Jan 27, 2022
    Configuration menu
    Copy the full SHA
    2798f71 View commit details
    Browse the repository at this point in the history

Commits on Feb 1, 2022

  1. Updated version of NXellipsometry.nxdl file

    @cmmngr
    cmmngr committed Feb 1, 2022
    Configuration menu
    Copy the full SHA
    39fd5e4 View commit details
    Browse the repository at this point in the history

  2. NXellipsometry.nxdl NX_COMPLEX changed to NX_NUMBER

    @cmmngr
    cmmngr committed Feb 1, 2022
    Configuration menu
    Copy the full SHA
    87746b4 View commit details
    Browse the repository at this point in the history

Commits on Feb 4, 2022

  1. Added definitions for default plottables NXapm

    @mkuehbach
    mkuehbach committed Feb 4, 2022
    Configuration menu
    Copy the full SHA
    719a5d9 View commit details
    Browse the repository at this point in the history

Commits on Feb 14, 2022

  1. Updated NXellipsometry with attribute in the plot group

    @sherjeelshabih
    sherjeelshabih committed Feb 14, 2022
    Configuration menu
    Copy the full SHA
    c2dc05b View commit details
    Browse the repository at this point in the history

  2. Updated doc string of axes attribute in plot in entry.

    @cmmngr
    cmmngr committed Feb 14, 2022
    Configuration menu
    Copy the full SHA
    b9c6524 View commit details
    Browse the repository at this point in the history

Commits on Feb 18, 2022

  1. Create nexus-fairmat-gen-docs 

    initial commit docs-gen workflow
    @mkuehbach
    mkuehbach authored Feb 18, 2022
    Configuration menu
    Copy the full SHA
    bb1b16c View commit details
    Browse the repository at this point in the history

  2. Delete nexus-fairmat-gen-docs 

    typo
    @mkuehbach
    mkuehbach authored Feb 18, 2022
    Configuration menu
    Copy the full SHA
    95167ff View commit details
    Browse the repository at this point in the history

  3. Create nexus-fairmat-gen-docs.yml 

    initial commit docs-gen workflow
    @mkuehbach
    mkuehbach authored Feb 18, 2022
    Configuration menu
    Copy the full SHA
    6c155aa View commit details
    Browse the repository at this point in the history

  4. Update nexus-fairmat-gen-docs.yml

    @sanbrock
    sanbrock authored Feb 18, 2022
    Configuration menu
    Copy the full SHA
    22ef08d View commit details
    Browse the repository at this point in the history

  5. Create nexus-fairmat-gen-docs.yml 

    experimenting with using original nexus_definitions docs publication workflow file with our fork of the NIAC repo
    @mkuehbach
    mkuehbach authored Feb 18, 2022
    Configuration menu
    Copy the full SHA
    7a84a9e View commit details
    Browse the repository at this point in the history

  6. Update nexus-fairmat-gen-docs.yml 

    restricted workflow to treat only pushes on the fairmat branch and support for manual triggering of the action
    @mkuehbach
    mkuehbach authored Feb 18, 2022
    Configuration menu
    Copy the full SHA
    c482ccd View commit details
    Browse the repository at this point in the history

  7. Update nexus-fairmat-gen-docs.yml 

    remove default steps executed when building nexus pdf manual
    @mkuehbach
    mkuehbach authored Feb 18, 2022
    Configuration menu
    Copy the full SHA
    0b9f8c9 View commit details
    Browse the repository at this point in the history

Commits on Feb 28, 2022

  1. Integrated Tommaso Pincelli's customization of the NeXus manual for t… 

    …he NeXus-FAIRmat-Proposal and modified descriptions, taking into account technique-specific rst documents from Carola, Tamas, and MarkusK, and templates for rerouting the manual into versioned sub-directories
    @mkuehbach
    mkuehbach committed Feb 28, 2022
    Configuration menu
    Copy the full SHA
    bbdfc36 View commit details
    Browse the repository at this point in the history

Commits on Mar 1, 2022

  1. Fixed ellipsometry, appdefs and makefile

    @mkuehbach
    mkuehbach committed Mar 1, 2022
    Configuration menu
    Copy the full SHA
    d122a69 View commit details
    Browse the repository at this point in the history

Commits on Mar 22, 2022

  1. updates to NXmpes and related base classes, including manually merged… 

    … extentions to existing base classes
    Laurenz Rettig committed Mar 22, 2022
    Configuration menu
    Copy the full SHA
    1d46b94 View commit details
    Browse the repository at this point in the history

Commits on Mar 30, 2022

  1. __init__.py files added

    @aalbino2
    aalbino2 committed Mar 30, 2022
    Configuration menu
    Copy the full SHA
    f8bde29 View commit details
    Browse the repository at this point in the history

Commits on Mar 31, 2022

  1. Moved all FAIRmat-related base and appdefs to contributed_defs, repla… 

    …ced NXellipsometry block selector for plain rich text, file ending yaml should be changed in the future, FAIRmat-related NXDLs were updated having now a single-line docstring
    @mkuehbach
    mkuehbach committed Mar 31, 2022
    Configuration menu
    Copy the full SHA
    aa4914d View commit details
    Browse the repository at this point in the history

  2. Fixed single line docstring scanbox and stage_lab

    @mkuehbach
    mkuehbach committed Mar 31, 2022
    Configuration menu
    Copy the full SHA
    bf7fcf0 View commit details
    Browse the repository at this point in the history

  3. Recovered NXdeflector, edited structure.rst from FAIRmat hunted for N… 

    …Xsample, NXmirror
    @mkuehbach
    mkuehbach committed Mar 31, 2022
    Configuration menu
    Copy the full SHA
    09ae1f0 View commit details
    Browse the repository at this point in the history

Commits on Jun 17, 2022

  1. Updated arpes definitions for fairmat-pages

    @domna
    domna committed Jun 17, 2022
    Configuration menu
    Copy the full SHA
    17ca677 View commit details
    Browse the repository at this point in the history

  2. Fixes pipe error

    @domna
    domna committed Jun 17, 2022
    Configuration menu
    Copy the full SHA
    dd9fd8c View commit details
    Browse the repository at this point in the history

Commits on Jun 20, 2022

  1. Renams spindispersion fields + small docstring corrections

    @domna
    domna committed Jun 20, 2022
    Configuration menu
    Copy the full SHA
    87017df View commit details
    Browse the repository at this point in the history

  2. Fixes some rst formattings for proper html output

    @domna
    domna committed Jun 20, 2022
    Configuration menu
    Copy the full SHA
    621ea62 View commit details
    Browse the repository at this point in the history

  3. Additional naming symplification in NXspindisperision

    @domna
    domna committed Jun 20, 2022
    Configuration menu
    Copy the full SHA
    415cc5d View commit details
    Browse the repository at this point in the history

Commits on Jun 21, 2022

  1. Merge pull request #2 from FAIRmat-Experimental/fairmat-pages-mpes 

    Updated arpes definitions for fairmat-pages
    @sanbrock
    sanbrock authored Jun 21, 2022
    Configuration menu
    Copy the full SHA
    c121f30 View commit details
    Browse the repository at this point in the history

  2. Updates xsi:schemaLocation

    @domna
    domna committed Jun 21, 2022
    Configuration menu
    Copy the full SHA
    9224acb View commit details
    Browse the repository at this point in the history

Commits on Jun 24, 2022

  1. Merge pull request #4 from nexusformat/main 

     Update our forked main branch with remote developments
    @sanbrock
    sanbrock authored Jun 24, 2022
    Configuration menu
    Copy the full SHA
    8b75670 View commit details
    Browse the repository at this point in the history

  2. Merge branch 'main' into fairmat

    @sanbrock
    sanbrock committed Jun 24, 2022
    Configuration menu
    Copy the full SHA
    b77ed51 View commit details
    Browse the repository at this point in the history

Commits on Jun 30, 2022

  1. added Appdef for IV_temp

    @sanbrock
    sanbrock committed Jun 30, 2022
    Configuration menu
    Copy the full SHA
    c421d29 View commit details
    Browse the repository at this point in the history

Commits on Jul 1, 2022

  1. fix type=NX_DIMENSIONLESS in NXxpcs

    @sanbrock
    sanbrock committed Jul 1, 2022
    Configuration menu
    Copy the full SHA
    d774dc9 View commit details
    Browse the repository at this point in the history

Commits on Jul 6, 2022

  1. local fix for bad use of NXtransformations in NXcxi_ptycho

    @sanbrock
    sanbrock committed Jul 6, 2022
    Configuration menu
    Copy the full SHA
    a44ea9b View commit details
    Browse the repository at this point in the history

Commits on Jul 7, 2022

  1. Updated introductory sections for the mainpage, em, and apm of the pr… 

    …oposal guiding to appdefs and base classes
    @mkuehbach
    mkuehbach committed Jul 7, 2022
    Configuration menu
    Copy the full SHA
    8061df7 View commit details
    Browse the repository at this point in the history

  2. Updated mainpage proposal

    @mkuehbach
    mkuehbach committed Jul 7, 2022
    Configuration menu
    Copy the full SHA
    b8288fe View commit details
    Browse the repository at this point in the history

Commits on Jul 11, 2022

  1. Reference to deprecated EM classes, and added template for IVtemp cur… 

    …ves appdef
    @mkuehbach
    mkuehbach committed Jul 11, 2022
    Configuration menu
    Copy the full SHA
    2b326ac View commit details
    Browse the repository at this point in the history

  2. Fixed dimensions index nx, ny issue in contributed/NXbeam, and edited… 

    … NXIVtemp to enable addition of EPICS to proposal and recompile nexus-fairmat-proposal
    @mkuehbach
    mkuehbach committed Jul 11, 2022
    Configuration menu
    Copy the full SHA
    4469fe4 View commit details
    Browse the repository at this point in the history

  3. Deactivated line in Makefile that became dysfunctional with NeXus Cod… 

    …e Camp 202206 changes
    @mkuehbach
    mkuehbach committed Jul 11, 2022
    Configuration menu
    Copy the full SHA
    50433d9 View commit details
    Browse the repository at this point in the history

Commits on Aug 3, 2022

  1. Adds transmission appdef

    @domna
    domna committed Aug 3, 2022
    Configuration menu
    Copy the full SHA
    cded2c7 View commit details
    Browse the repository at this point in the history

Commits on Aug 9, 2022

  1. Updates NXtransmission

    @domna
    domna committed Aug 9, 2022
    Configuration menu
    Copy the full SHA
    3800107 View commit details
    Browse the repository at this point in the history

Commits on Aug 12, 2022

  1. Updates NXmpes with correct path for NXmanipulator

    @domna
    domna committed Aug 12, 2022
    Configuration menu
    Copy the full SHA
    17e04b6 View commit details
    Browse the repository at this point in the history

Commits on Aug 15, 2022

  1. Updates NXmpes appdef

    @domna
    domna committed Aug 15, 2022
    Configuration menu
    Copy the full SHA
    298b4b0 View commit details
    Browse the repository at this point in the history

Commits on Aug 29, 2022

  1. Allows recommended for attributes

    @domna
    domna committed Aug 29, 2022
    Configuration menu
    Copy the full SHA
    406bf86 View commit details
    Browse the repository at this point in the history

Commits on Sep 1, 2022

  1. Added latest NXiv_temp to contributed

    @sherjeelshabih
    sherjeelshabih committed Sep 1, 2022
    Configuration menu
    Copy the full SHA
    50d25b5 View commit details
    Browse the repository at this point in the history

Commits on Sep 2, 2022

  1. Updated operator to be open to be named as user prefers

    @sherjeelshabih
    sherjeelshabih committed Sep 2, 2022
    Configuration menu
    Copy the full SHA
    f58f1c2 View commit details
    Browse the repository at this point in the history

  2. Adds NXuser to NXmpes

    @domna
    domna committed Sep 2, 2022
    Configuration menu
    Copy the full SHA
    0baa6e6 View commit details
    Browse the repository at this point in the history

  3. Added extra metadata fields to NXiv_temp

    @sherjeelshabih
    sherjeelshabih committed Sep 2, 2022
    Configuration menu
    Copy the full SHA
    94e3678 View commit details
    Browse the repository at this point in the history

  4. Sprint9 shape and geometry, updated NXem, and paraprobe application d… 

    …efinitions and base classes collected, and tested with make local
    @mkuehbach
    mkuehbach committed Sep 2, 2022
    Configuration menu
    Copy the full SHA
    d53d094 View commit details
    Browse the repository at this point in the history

Commits on Sep 3, 2022

  1. Made short title for sections on the front page shorter and better ma… 

    …tching the FAIRmat proposal names
    @mkuehbach
    mkuehbach committed Sep 3, 2022
    Configuration menu
    Copy the full SHA
    a59bc25 View commit details
    Browse the repository at this point in the history

  2. Small edits on proposed titles

    @mkuehbach
    mkuehbach committed Sep 3, 2022
    Configuration menu
    Copy the full SHA
    ca195ef View commit details
    Browse the repository at this point in the history

Commits on Sep 4, 2022

  1. Fixed NXapm, NXion, and NXpulser_apm to reflect changes in apm parser… 

    … for sprint9
    @mkuehbach
    mkuehbach committed Sep 4, 2022
    Configuration menu
    Copy the full SHA
    3a16d79 View commit details
    Browse the repository at this point in the history

Commits on Sep 5, 2022

  1. Updates NXellipsometry to use NXuser group instead of operator field

    @domna
    domna committed Sep 5, 2022
    Configuration menu
    Copy the full SHA
    3a3c35d View commit details
    Browse the repository at this point in the history

  2. Renamed NXiv_temp to NXtransport. Added NXpid and other changes to ba… 

    …se classes
    @sherjeelshabih
    sherjeelshabih committed Sep 5, 2022
    Configuration menu
    Copy the full SHA
    b0fe645 View commit details
    Browse the repository at this point in the history

Commits on Sep 6, 2022

  1. Fix issue with NXtransport having two rec attributes

    @sherjeelshabih
    sherjeelshabih committed Sep 6, 2022
    Configuration menu
    Copy the full SHA
    3f17ff0 View commit details
    Browse the repository at this point in the history

Commits on Sep 7, 2022

  1. Added NXsensor_scan and extended NXiv_temp from it

    @sherjeelshabih
    sherjeelshabih committed Sep 7, 2022
    Configuration menu
    Copy the full SHA
    9913490 View commit details
    Browse the repository at this point in the history

  2. consolidated sprint9 results for appdefs/base classes for apm, em, sh… 

    …ape/geometry, microstructures, paraprobe
    @mkuehbach
    mkuehbach committed Sep 7, 2022
    Configuration menu
    Copy the full SHA
    ff0c0c7 View commit details
    Browse the repository at this point in the history

  3. Merge pull request #6 from FAIRmat-Experimental/sprint9_nexus_em_apm_… 

    …cg_ms

Sprint9 shape and geometry, updated NXem, and paraprobe application d…
    @sanbrock
    sanbrock authored Sep 7, 2022
    Configuration menu
    Copy the full SHA
    01e1299 View commit details
    Browse the repository at this point in the history

  4. Fixed errors in new NXiv_temp and NXsensor_scan

    @sherjeelshabih
    sherjeelshabih committed Sep 7, 2022
    Configuration menu
    Copy the full SHA
    ecf0146 View commit details
    Browse the repository at this point in the history

  5. Ran the NXiv_temp and NXsensor_scan through yaml2nxdl

    @sherjeelshabih
    sherjeelshabih committed Sep 7, 2022
    Configuration menu
    Copy the full SHA
    9249b46 View commit details
    Browse the repository at this point in the history

  6. Ran NXpid through yaml2nxdl

    @sherjeelshabih
    sherjeelshabih committed Sep 7, 2022
    Configuration menu
    Copy the full SHA
    3b25fe7 View commit details
    Browse the repository at this point in the history

Commits on Sep 13, 2022

  1. sprint9_dev_frozen_apm_em

    @mkuehbach
    mkuehbach committed Sep 13, 2022
    Configuration menu
    Copy the full SHA
    d77d989 View commit details
    Browse the repository at this point in the history

Commits on Sep 14, 2022

  1. added missing deps supporting syntax check workflows

    @mkuehbach
    mkuehbach committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    dc90391 View commit details
    Browse the repository at this point in the history

  2. added workflow dispatch option

    @mkuehbach
    mkuehbach committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    a4b0e75 View commit details
    Browse the repository at this point in the history

  3. forcing action triggering on push for testing

    @mkuehbach
    mkuehbach committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    3bfbce9 View commit details
    Browse the repository at this point in the history

  4. testing

    @mkuehbach
    mkuehbach committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    0946ba6 View commit details
    Browse the repository at this point in the history

  5. Try env workflow w/o versions

    @domna
    domna committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    17a15fe View commit details
    Browse the repository at this point in the history

  6. Adds conda-forge to workflow

    @domna
    domna committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    c176345 View commit details
    Browse the repository at this point in the history

  7. Add conda-forge as channel

    @domna
    domna committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    d84244c View commit details
    Browse the repository at this point in the history

  8. Manually install sphinx_comment

    @domna
    domna committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    d6cfd39 View commit details
    Browse the repository at this point in the history

  9. Install sphinx_comments via pip

    @domna
    domna committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    f38ca6c View commit details
    Browse the repository at this point in the history

  10. Install sphinx-comments instead of sphinx_comments

    @domna
    domna committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    558368d View commit details
    Browse the repository at this point in the history

  11. Reset github action to push, prs and manually

    @domna
    domna committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    d119746 View commit details
    Browse the repository at this point in the history

  12. Merge pull request #8 from FAIRmat-Experimental/sprint9_dev_frozen_ap… 

    …m_em

ssprint9 dev frozen apm em
    @sanbrock
    sanbrock authored Sep 14, 2022
    Configuration menu
    Copy the full SHA
    39d8769 View commit details
    Browse the repository at this point in the history

  13. Resets syntax-check action to previous version

    @domna
    domna committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    9708322 View commit details
    Browse the repository at this point in the history

  14. Run syntax check on fairmat branch, too

    @domna
    domna committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    d92992b View commit details
    Browse the repository at this point in the history

  15. Added extends to NXiv_temp

    @sherjeelshabih
    sherjeelshabih committed Sep 14, 2022
    Configuration menu
    Copy the full SHA
    cb4218d View commit details
    Browse the repository at this point in the history

Commits on Sep 15, 2022

  1. Merge pull request #9 from FAIRmat-Experimental/NXiv_temp_extends_NXs… 

    …ensor_scan

Added extends to NXiv_temp
    @sanbrock
    sanbrock authored Sep 15, 2022
    Configuration menu
    Copy the full SHA
    1c3806d View commit details
    Browse the repository at this point in the history

Commits on Dec 15, 2022

  1. fix NXxpcs units issue

    @sanbrock
    sanbrock committed Dec 15, 2022
    Configuration menu
    Copy the full SHA
    7ca0338 View commit details
    Browse the repository at this point in the history

Commits on Jan 24, 2023

  1. Adds dispersion nxdls

    @domna
    domna committed Jan 24, 2023
    Configuration menu
    Copy the full SHA
    c0588fd View commit details
    Browse the repository at this point in the history