v1.5.0 - Amazing Antwerp
Improvements
- Updated to the nf-core template v2.13.0
- Updated all GATK modules to 4.5.0.0
- Moved the pipeline from https://github.com/CenterForMedicalGeneticsGhent/nf-cmgg-germline to https://github.com/nf-cmgg/germline
Changes
- VCF files created with
haplotypecaller
now have thehaplotypecaller
tag in the filename instead ofgatk4-joint
to keep naming consistent