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Update workflows/atacseq.nf
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Co-authored-by: Jose Espinosa-Carrasco <[email protected]>
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lpantano and JoseEspinosa authored Sep 25, 2024
1 parent 50afafb commit f3ff187
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions workflows/atacseq.nf
Original file line number Diff line number Diff line change
Expand Up @@ -627,10 +627,10 @@ workflow ATACSEQ {
)
ch_versions = ch_versions.mix(MERGED_REPLICATE_BAM_SHIFT_READS.out.versions)

ch_merged_replicate_markduplicate_bam = MERGED_REPLICATE_BAM_SHIFT_READS.out.bam
ch_merged_replicate_markduplicate_bai = MERGED_REPLICATE_BAM_SHIFT_READS.out.bai
ch_merged_replicate_markduplicate_bam = MERGED_REPLICATE_BAM_SHIFT_READS.out.bam
ch_merged_replicate_markduplicate_bai = MERGED_REPLICATE_BAM_SHIFT_READS.out.bai
ch_merged_replicate_markduplicate_flagstat = MERGED_REPLICATE_BAM_SHIFT_READS.out.flagstat
ch_merged_replicate_markduplicate_csi = MERGED_REPLICATE_BAM_SHIFT_READS.out.csi
ch_merged_replicate_markduplicate_csi = MERGED_REPLICATE_BAM_SHIFT_READS.out.csi
}
if (!params.skip_merged_replicate_bigwig) {
//
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