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It would be very helpful to have an option to change the MACS2 parameters for peak calling. The default ones are a good start but may not work for everything. The most important one to add would probably be the option to change (-q) (minimum FDR cutoff) and (-p) (p-value cut-off). It may also be useful to include the original MACS as peak caller. Thank you!
The text was updated successfully, but these errors were encountered:
It would be very helpful to have an option to change the MACS2 parameters for peak calling. The default ones are a good start but may not work for everything. The most important one to add would probably be the option to change (-q) (minimum FDR cutoff) and (-p) (p-value cut-off). It may also be useful to include the original MACS as peak caller. Thank you!
The text was updated successfully, but these errors were encountered: