Merge pull request #773 from stjudecab/master

Change StJude config to per-code mode to align with the HPC setups
nf-core · Oct 7, 2024 · 8f1f9a4 · 8f1f9a4
2 parents 5bd8f99 + 6f9f90f
commit 8f1f9a4
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/conf/stjude.config b/conf/stjude.config
@@ -12,7 +12,7 @@ params {
     config_profile_description = "St. Jude Children's Research Hospital HPC cluster (HPCF) profile"
     config_profile_url         = "https://www.stjude.org/"
 
-    max_cpus                   = 32
+    max_cpus                   = 64
     max_memory                 = 1024.GB
     max_time                   = 240.h
 }
@@ -78,8 +78,8 @@ cleanup = true
 executor {
     name            = 'lsf'
     queueSize       = 100
-    perTaskReserve  = false
-    perJobMemLimit  = true
+    perTaskReserve  = true
+    perJobMemLimit  = false
     submitRateLimit = "10/1sec"
     exitReadTimeout = "5 min"
     jobName         = {