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Change StJude config to per-code mode to align with the HPC setups #773

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merged 2 commits into from
Oct 7, 2024
Merged

Change StJude config to per-code mode to align with the HPC setups #773

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5910073
increase cpu limits
Oct 7, 2024
6f9f90f
change to per-code mode to align with hpc setups
Oct 7, 2024
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6 changes: 3 additions & 3 deletions conf/stjude.config
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Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ params {
config_profile_description = "St. Jude Children's Research Hospital HPC cluster (HPCF) profile"
config_profile_url = "https://www.stjude.org/"

max_cpus = 32
max_cpus = 64
max_memory = 1024.GB
max_time = 240.h
}
Expand Down Expand Up @@ -78,8 +78,8 @@ cleanup = true
executor {
name = 'lsf'
queueSize = 100
perTaskReserve = false
perJobMemLimit = true
perTaskReserve = true
perJobMemLimit = false
submitRateLimit = "10/1sec"
exitReadTimeout = "5 min"
jobName = {
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