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FIX: remove mem assignement for SAMTOOLS_SORT #1042

Merged
merged 2 commits into from
Jun 2, 2023
Merged

FIX: remove mem assignement for SAMTOOLS_SORT #1042

merged 2 commits into from
Jun 2, 2023

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maxulysse
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Back to normal

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github-actions bot commented Jun 2, 2023 •
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nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit d286eb3

+| ✅ 149 tests passed       |+
#| ❔   5 tests were ignored |#
!| ❗   4 tests had warnings |!

❗ Test warnings:

  • files_exist - File not found: .github/workflows/awstest.yml
  • files_exist - File not found: .github/workflows/awsfulltest.yml
  • nextflow_config - Config manifest.version should end in dev: '3.12.0'
  • pipeline_todos - TODO string in methods_description_template.yml: #Update the HTML below to your prefered methods description, e.g. add publication citation for this pipeline

❔ Tests ignored:

  • files_unchanged - File ignored due to lint config: assets/email_template.html
  • files_unchanged - File ignored due to lint config: assets/email_template.txt
  • files_unchanged - File ignored due to lint config: lib/NfcoreSchema.groovy
  • files_unchanged - File ignored due to lint config: lib/NfcoreTemplate.groovy
  • actions_awstest - 'awstest.yml' workflow not found: /home/runner/work/rnaseq/rnaseq/.github/workflows/awstest.yml

✅ Tests passed:

Run details

  • nf-core/tools version 2.8
  • Run at 2023-06-02 11:52:22

drpatelh
drpatelh approved these changes Jun 2, 2023
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Merging because tests will be re-run on #1040

@drpatelh drpatelh merged commit 14ba0e0 into nf-core:dev Jun 2, 2023
@maxulysse maxulysse deleted the samtools_sort branch June 2, 2023 11:54
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@drpatelh drpatelh drpatelh approved these changes

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@maxulysse @drpatelh