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Fix: Convert bcf_annotations.tbi from empty() to value channel to prevent stalling #6118

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Fix: Convert bcf_annotations.tbi from empty() to value channel to prevent stalling

Fix: Convert bcf_annotations.tbi from empty() to value channel to prevent stalling #6118

Run time

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Job Run time
Check for changes (nf-test)
4s
Check for changes (pytest)
8s
pipeline_sarek test,docker NF
9m 31s
default docker NF 23.04.0
5m 42s
default docker NF latest-everything
7m 46s
tumor_normal_pair docker NF 23.04.0
5m 3s
tumor_normal_pair docker NF latest-everything
4m 40s
save_mapped_only docker NF 23.04.0
5m 13s
save_mapped_only docker NF latest-everything
5m 11s
save_output_as_bam_only docker NF 23.04.0
6m 47s
save_output_as_bam_only docker NF latest-everything
6m 10s
skip_all_qc docker NF 23.04.0
4m 43s
skip_all_qc docker NF latest-everything
5m 1s
skip_markduplicates docker NF 23.04.0
10m 48s
skip_markduplicates docker NF latest-everything
9m 47s
validation_checks docker NF 23.04.0
3m 55s
validation_checks docker NF latest-everything
3m 5s
alignment_from_everything docker NF 23.04.0
7m 32s
alignment_from_everything docker NF latest-everything
6m 3s
confirm-pass
1s
1h 47m 10s