updated docs #34
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: TreeSwift Tests | |
| on: [push] | |
| jobs: | |
| treeswift_tests: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Set up Git repository | |
| uses: actions/checkout@v2 | |
| - name: Run TreeSwift Tests | |
| run: | | |
| sudo apt-get update && sudo apt-get install -y python3 python3-pip && \ | |
| sudo -H pip3 install git+https://github.com/niemasd/TreeSwift.git && \ | |
| for f in .tests/*.tre* ; do echo "$f" | rev | cut -d'/' -f1 | rev && python3 -c "from treeswift import read_tree_newick; read_tree_newick('$f')" && echo "" || exit 1 ; done && \ | |
| for f in .tests/*.nex .tests/*.nex.* ; do echo "$f" | rev | cut -d'/' -f1 | rev && python3 -c "from treeswift import read_tree_nexus; read_tree_nexus('$f')" && echo "" || exit 1 ; done && \ | |
| for f in .tests/*.nexml* ; do echo "$f" | rev | cut -d'/' -f1 | rev && python3 -c "from treeswift import read_tree_nexml; read_tree_nexml('$f')" && echo "" || exit 1 ; done |