iHMP Data Exploration #10
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Lesson materials and helpful links from today: https://hackmd.io/dW9EoOh3T42eed9q21NLJQ?view Documentation for software install on AWS Jupyter notebooks: https://hackmd.io/rrjnYcZ3QemfuDpt82oomw |
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Video runthrough of the whole tutorial (20 minutes): https://www.loom.com/share/72bfbe40d47c43d8ac71a1923ac15a22 |
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loom video hosted at video.ucdavis.edu: https://video.ucdavis.edu/media/t/1_yze086oo |
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first part of the ihmp walkthrough lesson from the may hackathon (see nih-cfde/2022-may-hackathon#11 and nih-cfde/2022-may-hackathon#10
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add part about jupyerhub from nih-cfde/2022-may-hackathon#10
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This session will involve getting Human Microbiome Project (HMP) data off of the CFDE Portal and working in the cloud using Amazon Web Services. Participants will be provided with an Amazon Web Services account and do basic bioinformatics analysis with sequencing data. Familiarity with UNIX is required.
Links:
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