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ENH: SDC integration #55

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@eilidhmacnicol eilidhmacnicol commented May 9, 2023

Changes proposed in this pull request

Including SDC to improve co-registration between anatomical and functional.
Currently tested only on PEPOLAR (topup)
SyN (fieldmap-less) correction depends on nipreps/sdcflows#312
Other methods still to be tested.

Depends on a docker overhaul (#54 - which is still a wip)

Also contains fixes for #48 and #50 given that they were required for testing.

Documentation that should be reviewed

@oesteban oesteban self-requested a review December 13, 2023 09:45
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