FIX: replace np.float by np.float64 #448
Workflow file for this run
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Python package | |
| on: | |
| push: | |
| branches: [ '*' ] | |
| tags: [ '*' ] | |
| pull_request: | |
| branches: [ master, 'maint/*' ] | |
| jobs: | |
| build: | |
| if: "!startsWith(github.ref, 'refs/tags/') && !contains(github.event.head_commit.message, '[skip ci]')" | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ['3.8', '3.9', '3.11'] | |
| pip: ["pip==21.2", "pip~=23.0"] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Fetch all tags (for setuptools_scm to work) | |
| run: | | |
| /usr/bin/git -c protocol.version=2 fetch --tags --prune --unshallow origin | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: actions/cache@v1 | |
| with: | |
| path: $HOME/.cache/pip | |
| key: pip-cache-v1 | |
| restore-keys: | | |
| pip-cache- | |
| - name: Build in confined environment and interpolate version | |
| run: | | |
| python -m venv /tmp/buildenv | |
| source /tmp/buildenv/bin/activate | |
| python -m pip install -U build hatch hatchling pip twine docutils wheel | |
| python -m build -s -w | |
| python -m twine check dist/mriqc-* | |
| mv dist /tmp/package | |
| rm -rf mriqc.egg-info/ | |
| # Interpolate version | |
| if [[ "$GITHUB_REF" == refs/tags/* ]]; then | |
| TAG=${GITHUB_REF##*/} | |
| fi | |
| THISVERSION=$( python -m hatch version | tail -n1 | xargs ) | |
| THISVERSION=${TAG:-$THISVERSION} | |
| echo "Expected VERSION: \"${THISVERSION}\"" | |
| echo "THISVERSION=${THISVERSION}" >> $GITHUB_ENV | |
| - name: Install in confined environment [pip] | |
| run: | | |
| python -m venv /tmp/pip | |
| source /tmp/pip/bin/activate | |
| python -m pip install -U hatch hatchling "${{ matrix.pip }}" wheel "cython==3.0.0b2" "numpy ~=1.20" scipy | |
| python -m pip install . | |
| INSTALLED_VERSION=$(python -c 'import mriqc as qc; print(qc.__version__, end="")') | |
| echo "VERSION: \"${THISVERSION}\"" | |
| echo "INSTALLED: \"${INSTALLED_VERSION}\"" | |
| test "${INSTALLED_VERSION}" = "${THISVERSION}" | |
| - name: Install in confined environment [sdist] | |
| run: | | |
| python -m venv /tmp/install_sdist | |
| source /tmp/install_sdist/bin/activate | |
| python -m pip install -U hatch hatchling "${{ matrix.pip }}" wheel "cython==3.0.0b2" "numpy ~=1.20" scipy | |
| python -m pip install /tmp/package/mriqc*.tar.gz | |
| INSTALLED_VERSION=$(python -c 'import mriqc as qc; print(qc.__version__, end="")') | |
| echo "VERSION: \"${THISVERSION}\"" | |
| echo "INSTALLED: \"${INSTALLED_VERSION}\"" | |
| test "${INSTALLED_VERSION}" = "${THISVERSION}" | |
| - name: Install in confined environment [wheel] | |
| run: | | |
| python -m venv /tmp/install_wheel | |
| source /tmp/install_wheel/bin/activate | |
| python -m pip install -U hatch hatchling "${{ matrix.pip }}" wheel "cython==3.0.0b2" "numpy ~=1.20" scipy | |
| python -m pip install /tmp/package/mriqc*.whl | |
| INSTALLED_VERSION=$(python -c 'import mriqc as qc; print(qc.__version__, end="")') | |
| echo "INSTALLED: \"${INSTALLED_VERSION}\"" | |
| test "${INSTALLED_VERSION}" = "${THISVERSION}" | |
| flake8: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.9 | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: 3.9 | |
| - run: pip install flake8-pyproject | |
| - run: flake8 mriqc/ | |
| codespell: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.9 | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: 3.9 | |
| - run: pip install codespell tomli | |
| - run: codespell |