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infant_recon_all does not guarantee reproducibility #127

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mgxd opened this issue Oct 8, 2021 · 3 comments
Open

infant_recon_all does not guarantee reproducibility #127

mgxd opened this issue Oct 8, 2021 · 3 comments
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bug Something isn't working

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@mgxd
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mgxd commented Oct 8, 2021

What happened?

Looking through the infant_recon_all log, this line pops up a few times.

mris_sphere supposed to be reproducible but seed not set

What command did you use?

infant_recon_all --age 2 --masked masked.nii.gz --outdir /work/sub-01 --subject sub-01

Version

21.0.0 release candidates (rc)

Relevant log output

No response

Add any additional information or context about the problem here.

cc @lillazollei

@mgxd mgxd added the bug Something isn't working label Oct 8, 2021
@chiuhoward
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was there an update on this? i also see this message but i'm not sure if it will affect the output?

@mgxd
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mgxd commented Apr 5, 2024

AFAIK, there hasn't been any updates to infant_recon_all - I haven't inspected the log in awhile but it's possible the seed used is logged there, perhaps @lillazollei may know

@lillazollei
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lillazollei commented Apr 5, 2024 via email

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