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added some formats to the converter spec
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tclose committed Aug 16, 2023
1 parent bfbf360 commit dbfa252
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions nipype-auto-conv/specs/fast_surfer.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,9 @@ inputs:
# from the nipype interface, but you may want to be more specific, particularly
# for file types, where specifying the format also specifies the file that will be
# passed to the field in the automatically generated unittests.
T1_files: generic/file
T1_files: medimage/nifti-gz+list-of
# type=file|default=<undefined>: T1 full head input (not bias corrected, global path)
fs_license: generic/file
fs_license: text/plain
# type=file|default=<undefined>: Path to FreeSurfer license key file.
seg: generic/file
# type=file|default=<undefined>: Pre-computed segmentation file
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# passed to the field in the automatically generated unittests.
orig_nu: generic/file
# type=file: Base image conformed to Fastsurfer space and nonuniformity corrected
T1: generic/file
T1: medimage/nifti-gz
# type=file: Intensity normalized whole-head volume
aseg: generic/file
# type=file: Volumetric map of regions from automatic segmentation
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