Enhance/gahm converge #949
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| paths: | |
| - '**.py' | |
| - '.github/workflows/tests.yml' | |
| - 'pyproject.toml' | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| lint: | |
| name: lint | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: clone repository | |
| uses: actions/checkout@v4 | |
| - name: install Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.9 | |
| - name: load cached Python installation | |
| id: cache | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ env.pythonLocation }} | |
| key: lint-${{ runner.os }}-${{ env.pythonLocation }}-${{ hashFiles('pyproject.toml') }} | |
| - name: install linters | |
| run: pip install flake8 oitnb | |
| - name: lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: lint with oitnb | |
| run: oitnb . --check | |
| test: | |
| needs: lint | |
| name: test | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ ubuntu-latest, macos-latest ] | |
| python-version: [ '3.9', '3.10', '3.11' ] | |
| steps: | |
| - name: clone repository | |
| uses: actions/checkout@v4 | |
| - name: conda virtual environment | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| init-shell: bash | |
| environment-name: ci-env | |
| create-args: >- | |
| python=${{ matrix.python-version }} | |
| libnetcdf | |
| hdf5 | |
| udunits2 | |
| - name: install dependencies | |
| run: pip install ".[testing]" | |
| shell: micromamba-shell {0} | |
| - name: rebuild netcdf from source | |
| run: pip install --upgrade --force-reinstall --no-deps --no-cache-dir netcdf4 --no-binary netcdf4 | |
| shell: micromamba-shell {0} | |
| - name: run tests | |
| run: pytest --numprocesses auto | |
| shell: micromamba-shell {0} | |
| test_with_coverage: | |
| needs: [ lint, test ] | |
| name: test with coverage | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: clone repository | |
| uses: actions/checkout@v4 | |
| - name: conda virtual environment | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| init-shell: bash | |
| environment-name: ci-env | |
| create-args: >- | |
| python=3.9 | |
| libnetcdf | |
| hdf5 | |
| udunits2 | |
| - name: install dependencies | |
| run: pip install ".[testing]" | |
| shell: micromamba-shell {0} | |
| - name: rebuild netcdf from source | |
| run: pip install --upgrade --force-reinstall --no-deps --no-cache-dir netcdf4 --no-binary netcdf4 | |
| shell: micromamba-shell {0} | |
| - name: run tests with coverage | |
| run: pytest --numprocesses auto --cov . --cov-report xml:coverage.xml | |
| shell: micromamba-shell {0} | |
| - name: show coverage report | |
| run: coverage report | |
| shell: micromamba-shell {0} | |
| - name: upload coverage to Codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| files: coverage.xml | |
| fail_ci_if_error: true |