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remove oort step in the release pipeline (#2204)
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Co-authored-by: Anita Caron <[email protected]>
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Anita Caron and anitacaron authored Oct 19, 2023
1 parent 02face8 commit 6330fa0
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4 changes: 3 additions & 1 deletion src/ontology/cl.Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -50,7 +50,9 @@ tmp/source-merged.obo: $(SRC) tmp/asserted-subclass-of-axioms.obo config/remove_
oort: tmp/source-merged.obo
ontology-release-runner --reasoner elk tmp/source-merged.obo --no-subsets --skip-ontology-checks --allow-equivalent-pairs --simple --relaxed --asserted --allow-overwrite --outdir oort

test: oort
# With the new OWLAPI 4.5.26, which allows arbitrary annotation properties in the OBO parser and oort using a previous OWLAPI version,
# we are having conflicts when converting it. Also, the oort step is not used in any release artefact.
#test: oort

tmp/$(ONT)-stripped.owl: oort
$(ROBOT) filter --input oort/$(ONT)-simple.owl --term-file tmp/cl_terms.txt --trim false \
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