Update cl-edit.owl (#2597)

Fixing Tanycyte location
obophenotype · Sep 23, 2024 · 8424cde · 8424cde
1 parent 2b2910b
commit 8424cde
Showing 1 changed file with 7 additions and 2 deletions.
diff --git a/src/ontology/cl-edit.owl b/src/ontology/cl-edit.owl
@@ -3162,6 +3162,7 @@ Declaration(Class(obo:UBERON_0001004))
 Declaration(Class(obo:UBERON_0001335))
 Declaration(Class(obo:UBERON_0001786))
 Declaration(Class(obo:UBERON_0001881))
+Declaration(Class(obo:UBERON_0002197))
 Declaration(Class(obo:UBERON_0002222))
 Declaration(Class(obo:UBERON_0002339))
 Declaration(Class(obo:UBERON_0002548))
@@ -14553,6 +14554,7 @@ AnnotationAssertion(oboInOwl:hasDbXref obo:CL_0002085 "FMA:54560")
 AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:29351662") oboInOwl:hasExactSynonym obo:CL_0002085 "stretch cell")
 AnnotationAssertion(rdfs:label obo:CL_0002085 "tanycyte")
 SubClassOf(obo:CL_0002085 obo:CL_0000683)
+SubClassOf(obo:CL_0002085 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0004670))
 
 # Class: obo:CL_0002086 (specialized cardiac myocyte)
 
@@ -32325,7 +32327,7 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:29351662") oboInOwl:hasR
 AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:26578855") rdfs:comment obo:CL_4042018 "In rodents, this type of tanycyte is more developmentally advanced than alpha1 tanycytes, shows a high neurogenic competence and expresses the following markers DARPP-32, Vimentin, GPR50, Connexin-43, GLT-1, GLUT1(+) (Goodman and Hajihosseini 2015; Prevot et al., 2018)")
 AnnotationAssertion(rdfs:label obo:CL_4042018 "alpha2-tanycyte"@en)
 SubClassOf(obo:CL_4042018 obo:CL_0002085)
-SubClassOf(obo:CL_4042018 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0001932))
+SubClassOf(obo:CL_4042018 ObjectSomeValuesFrom(obo:RO_0002131 obo:UBERON_0001932))
 SubClassOf(obo:CL_4042018 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000014419))
 
 # Class: obo:CL_4042019 (beta1-tanycyte)
@@ -32337,6 +32339,8 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:29351662") oboInOwl:hasR
 AnnotationAssertion(rdfs:label obo:CL_4042019 "beta1-tanycyte"@en)
 SubClassOf(obo:CL_4042019 obo:CL_0002085)
 SubClassOf(obo:CL_4042019 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0006250))
+SubClassOf(obo:CL_4042019 ObjectSomeValuesFrom(obo:RO_0002131 obo:UBERON_0002197))
+SubClassOf(obo:CL_4042019 ObjectSomeValuesFrom(obo:RO_0002215 obo:GO_0032274))
 SubClassOf(obo:CL_4042019 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000007479))
 SubClassOf(obo:CL_4042019 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000007489))
 
@@ -32349,6 +32353,7 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:29351662") oboInOwl:hasR
 AnnotationAssertion(rdfs:label obo:CL_4042020 "beta2-tanycyte"@en)
 SubClassOf(obo:CL_4042020 obo:CL_0002085)
 SubClassOf(obo:CL_4042020 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0006250))
+SubClassOf(obo:CL_4042020 ObjectSomeValuesFrom(obo:RO_0002131 obo:UBERON_0002197))
 SubClassOf(obo:CL_4042020 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000007479))
 SubClassOf(obo:CL_4042020 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000007489))
 
@@ -32358,7 +32363,7 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:10467245") obo:IAO_00001
 AnnotationAssertion(terms:contributor obo:CL_4042021 <https://orcid.org/0000-0002-0098-8958>)
 AnnotationAssertion(terms:date obo:CL_4042021 "2024-09-02T11:42:12Z"^^xsd:dateTime)
 AnnotationAssertion(Annotation(oboInOwl:SynonymTypeProperty obo:OMO_0003000) Annotation(oboInOwl:hasDbXref "PMID:12429182") oboInOwl:hasRelatedSynonym obo:CL_4042021 "NRP")
-AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:9354325") Annotation(oboInOwl:hasDbXref "PMID:12429182") rdfs:comment obo:CL_4042021 "In vitro cultures of embryonic mouse neural tubes show that neuronal-restricted precursors (NRPs) are derived from multipotent neuroepithelial cells to give rise to neurons. This progression suggests a linear relationship between multipotent progenitors and neuronal-restricted differentiation. (Mayer-Proschel et al., 1997). In the spinal cord of rats, neural-restricted precursor cells give rise cholinergic, GABAergic, glutametergic neurons (Cao and Howard et al., 2002).")
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:12429182") Annotation(oboInOwl:hasDbXref "PMID:9354325") rdfs:comment obo:CL_4042021 "In vitro cultures of embryonic mouse neural tubes show that neuronal-restricted precursors (NRPs) are derived from multipotent neuroepithelial cells to give rise to neurons. This progression suggests a linear relationship between multipotent progenitors and neuronal-restricted differentiation. (Mayer-Proschel et al., 1997). In the spinal cord of rats, neural-restricted precursor cells give rise cholinergic, GABAergic, glutametergic neurons (Cao and Howard et al., 2002).")
 AnnotationAssertion(rdfs:label obo:CL_4042021 "neuronal-restricted precursor"@en)
 SubClassOf(obo:CL_4042021 obo:CL_0000123)
 SubClassOf(obo:CL_4042021 obo:CL_0011026)