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[NTR-cxg] neuromuscular junction #2678

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sebozzie opened this issue Oct 18, 2024 · 2 comments · Fixed by #2714
Closed

[NTR-cxg] neuromuscular junction #2678

sebozzie opened this issue Oct 18, 2024 · 2 comments · Fixed by #2714

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@sebozzie
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sebozzie commented Oct 18, 2024

Please check that the term does not already exist by using the ontology search tool OLS:
https://www.ebi.ac.uk/ols4/ontologies/cl

Preferred term label
neuromuscular junction

Synonym(s) (add reference(s), please)
neuromuscular junction nuclei https://doi.org/10.1038/s41467-020-20063-w
NMJ https://doi.org/10.1038/s41467-020-18789-8
NMJ nuclei https://doi.org/10.1038/s41467-020-20064-9 - PMID: 33311457
NMJ myonuclei - PMID:33311464

Definition
Neuromuscular junction nuclei are specialized muscle nuclei located at the synapse where a motor neuron communicates with a muscle fiber. They regulate the production of proteins essential for maintaining the structure and function of the neuromuscular junction, supporting efficient nerve-muscle signaling for muscle contraction.

Parent cell type term
CL:0008046: extrafusal muscle fiber

Anatomical structure where the cell type is found
UBERON:0001134: skeletal muscle tissue

Your ORCID
0009-0001-6947-615X

Additional notes or concerns

https://doi.org/10.1038/s41467-020-20063-w: "NMJ nuclei were positive for known canonical markers such as Chrne, Etv5, Colq, and Musk..."

@dosumis
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dosumis commented Oct 20, 2024

Given the suggestion of 'CL:0008046; extrafusal muscle fiber' as a parent I assume that this term is intended for skeletal muscle NMJ nuclei is that correct?

suggested label: skeletal nueuromuscular junction nucleus (?)
Suggested EC def: 'GO:nucleus and part_of some 'CL:0008046; extrafusal muscle fiber' and overlaps some ' GO:0098523; neuromuscular junction of myotube'

@sebozzie
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@dosumis Indeed, it is intended for skeletal muscle NMJ nuclei. In that case I would suggest the label "neuromuscular junction nuclei" or "NMJ nuclei".

@Caroline-99 Caroline-99 assigned Caroline-99 and unassigned AvolaAmg Oct 30, 2024
@Caroline-99 Caroline-99 added this to the Milestone 11/11/2024 milestone Oct 31, 2024
Caroline-99 added a commit that referenced this issue Oct 31, 2024
Added a new term with textual and logical defs, references and synonyms
@Caroline-99 Caroline-99 linked a pull request Oct 31, 2024 that will close this issue
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4 participants