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Fixing tanycyte location #2597

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Sep 23, 2024
Merged

Fixing tanycyte location #2597

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9 changes: 7 additions & 2 deletions src/ontology/cl-edit.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -3162,6 +3162,7 @@ Declaration(Class(obo:UBERON_0001004))
Declaration(Class(obo:UBERON_0001335))
Declaration(Class(obo:UBERON_0001786))
Declaration(Class(obo:UBERON_0001881))
Declaration(Class(obo:UBERON_0002197))
Declaration(Class(obo:UBERON_0002222))
Declaration(Class(obo:UBERON_0002339))
Declaration(Class(obo:UBERON_0002548))
Expand Down Expand Up @@ -14553,6 +14554,7 @@ AnnotationAssertion(oboInOwl:hasDbXref obo:CL_0002085 "FMA:54560")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:29351662") oboInOwl:hasExactSynonym obo:CL_0002085 "stretch cell")
AnnotationAssertion(rdfs:label obo:CL_0002085 "tanycyte")
SubClassOf(obo:CL_0002085 obo:CL_0000683)
SubClassOf(obo:CL_0002085 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0004670))

# Class: obo:CL_0002086 (specialized cardiac myocyte)

Expand Down Expand Up @@ -32325,7 +32327,7 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:29351662") oboInOwl:hasR
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:26578855") rdfs:comment obo:CL_4042018 "In rodents, this type of tanycyte is more developmentally advanced than alpha1 tanycytes, shows a high neurogenic competence and expresses the following markers DARPP-32, Vimentin, GPR50, Connexin-43, GLT-1, GLUT1(+) (Goodman and Hajihosseini 2015; Prevot et al., 2018)")
AnnotationAssertion(rdfs:label obo:CL_4042018 "alpha2-tanycyte"@en)
SubClassOf(obo:CL_4042018 obo:CL_0002085)
SubClassOf(obo:CL_4042018 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0001932))
SubClassOf(obo:CL_4042018 ObjectSomeValuesFrom(obo:RO_0002131 obo:UBERON_0001932))
SubClassOf(obo:CL_4042018 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000014419))

# Class: obo:CL_4042019 (beta1-tanycyte)
Expand All @@ -32337,6 +32339,8 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:29351662") oboInOwl:hasR
AnnotationAssertion(rdfs:label obo:CL_4042019 "beta1-tanycyte"@en)
SubClassOf(obo:CL_4042019 obo:CL_0002085)
SubClassOf(obo:CL_4042019 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0006250))
SubClassOf(obo:CL_4042019 ObjectSomeValuesFrom(obo:RO_0002131 obo:UBERON_0002197))
SubClassOf(obo:CL_4042019 ObjectSomeValuesFrom(obo:RO_0002215 obo:GO_0032274))
SubClassOf(obo:CL_4042019 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000007479))
SubClassOf(obo:CL_4042019 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000007489))

Expand All @@ -32349,6 +32353,7 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:29351662") oboInOwl:hasR
AnnotationAssertion(rdfs:label obo:CL_4042020 "beta2-tanycyte"@en)
SubClassOf(obo:CL_4042020 obo:CL_0002085)
SubClassOf(obo:CL_4042020 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0006250))
SubClassOf(obo:CL_4042020 ObjectSomeValuesFrom(obo:RO_0002131 obo:UBERON_0002197))
SubClassOf(obo:CL_4042020 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000007479))
SubClassOf(obo:CL_4042020 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000007489))

Expand All @@ -32358,7 +32363,7 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:10467245") obo:IAO_00001
AnnotationAssertion(terms:contributor obo:CL_4042021 <https://orcid.org/0000-0002-0098-8958>)
AnnotationAssertion(terms:date obo:CL_4042021 "2024-09-02T11:42:12Z"^^xsd:dateTime)
AnnotationAssertion(Annotation(oboInOwl:SynonymTypeProperty obo:OMO_0003000) Annotation(oboInOwl:hasDbXref "PMID:12429182") oboInOwl:hasRelatedSynonym obo:CL_4042021 "NRP")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:9354325") Annotation(oboInOwl:hasDbXref "PMID:12429182") rdfs:comment obo:CL_4042021 "In vitro cultures of embryonic mouse neural tubes show that neuronal-restricted precursors (NRPs) are derived from multipotent neuroepithelial cells to give rise to neurons. This progression suggests a linear relationship between multipotent progenitors and neuronal-restricted differentiation. (Mayer-Proschel et al., 1997). In the spinal cord of rats, neural-restricted precursor cells give rise cholinergic, GABAergic, glutametergic neurons (Cao and Howard et al., 2002).")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:12429182") Annotation(oboInOwl:hasDbXref "PMID:9354325") rdfs:comment obo:CL_4042021 "In vitro cultures of embryonic mouse neural tubes show that neuronal-restricted precursors (NRPs) are derived from multipotent neuroepithelial cells to give rise to neurons. This progression suggests a linear relationship between multipotent progenitors and neuronal-restricted differentiation. (Mayer-Proschel et al., 1997). In the spinal cord of rats, neural-restricted precursor cells give rise cholinergic, GABAergic, glutametergic neurons (Cao and Howard et al., 2002).")
AnnotationAssertion(rdfs:label obo:CL_4042021 "neuronal-restricted precursor"@en)
SubClassOf(obo:CL_4042021 obo:CL_0000123)
SubClassOf(obo:CL_4042021 obo:CL_0011026)
Expand Down
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