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The following sources need to have their evidence directionality (association.response_type.keyword) updated.
OncoKB:
Loaded with "N/A". All associations are predictive of response unless otherwise indicated. See http://oncokb.org/#/levels for details.
CIViC:
Need to prepend the evidence_direction field to evidence_type, e.g. Supports Sensitivity instead of Sensitivity. Also, for clarity, we should map positive and negative to positive outcome and negative outcome.
MolecularMatch:
Looks like it's using the evidence level. Should be using the responseType value.
Jax-CKB and CGI look good. PMKB is all N/A, but it appears that these data are unavailable, so there's nothing to do about it.
The text was updated successfully, but these errors were encountered:
The following sources need to have their evidence directionality (
association.response_type.keyword
) updated.OncoKB:
Loaded with "N/A". All associations are predictive of response unless otherwise indicated. See http://oncokb.org/#/levels for details.
CIViC:
Need to prepend the
evidence_direction
field toevidence_type
, e.g.Supports Sensitivity
instead ofSensitivity
. Also, for clarity, we should mappositive
andnegative
topositive outcome
andnegative outcome
.MolecularMatch:
Looks like it's using the evidence level. Should be using the
responseType
value.Jax-CKB and CGI look good. PMKB is all N/A, but it appears that these data are unavailable, so there's nothing to do about it.
The text was updated successfully, but these errors were encountered: