-
Notifications
You must be signed in to change notification settings - Fork 97
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge branch 'release-3.2.x' into TASK-6324
- Loading branch information
Showing
44 changed files
with
1,346 additions
and
1,197 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,19 +1,35 @@ | ||
name: Pull request approve workflow | ||
run-name: 'Pull request approve workflow ${{ github.event.pull_request.head.ref }} -> ${{ github.event.pull_request.base.ref }} by @${{ github.actor }}' | ||
|
||
on: | ||
pull_request_review: | ||
types: [submitted] | ||
types: [ submitted ] | ||
|
||
jobs: | ||
build: | ||
uses: opencb/java-common-libs/.github/workflows/build-java-app-workflow.yml@develop | ||
with: | ||
maven_opts: -Phdp3.1,RClient -Dopencga.war.name=opencga -Dcheckstyle.skip | ||
calculate-xetabase-branch: | ||
name: Calculate Xetabase branch | ||
runs-on: ubuntu-22.04 | ||
outputs: | ||
xetabase_branch: ${{ steps.get_xetabase_branch.outputs.xetabase_branch }} | ||
steps: | ||
- name: Clone project | ||
uses: actions/checkout@v4 | ||
with: | ||
fetch-depth: '10' | ||
- id: get_xetabase_branch | ||
name: "Get current branch for Xetabase from target branch" | ||
run: | | ||
chmod +x ./.github/workflows/scripts/get-xetabase-branch.sh | ||
xetabase_branch=$(./.github/workflows/scripts/get-xetabase-branch.sh ${{ github.event.pull_request.base.ref }}) | ||
echo "__Xetabase ref:__ \"${xetabase_branch}\"" | tee -a ${GITHUB_STEP_SUMMARY} | ||
echo "xetabase_branch=${xetabase_branch}" >> $GITHUB_OUTPUT | ||
test: | ||
name: "Run all tests before merging, ie. short, medium and long tests." | ||
uses: ./.github/workflows/test-analysis.yml | ||
needs: build | ||
name: "Run all tests before merging" | ||
needs: calculate-xetabase-branch | ||
uses: opencb/java-common-libs/.github/workflows/test-xetabase-workflow.yml@TASK-6399 | ||
with: | ||
test_profile: runShortTests,runMediumTests,runLongTests | ||
branch: ${{ needs.calculate-xetabase-branch.outputs.xetabase_branch }} | ||
task: ${{ github.event.pull_request.head.ref }} | ||
secrets: inherit | ||
|
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,50 @@ | ||
#!/bin/bash | ||
|
||
# Function to calculate the corresponding branch of Xetabase project | ||
get_xetabase_branch() { | ||
# Input parameter (branch name) | ||
input_branch="$1" | ||
|
||
# If the branch begins with 'TASK' and exists in the opencga-enterprise repository, I return it | ||
if [[ $input_branch == TASK* ]]; then | ||
if [ "$(git ls-remote https://github.com/zetta-genomics/opencga-enterprise.git "$input_branch" )" ] ; then | ||
echo "$GIT_BRANCH"; | ||
exit 0; | ||
fi | ||
fi | ||
|
||
# Check if the branch name is "develop" in that case return the same branch name | ||
if [[ "$input_branch" == "develop" ]]; then | ||
echo "develop" | ||
return 0 | ||
fi | ||
|
||
# Check if the branch name starts with "release-" and follows the patterns "release-a.b.x" or "release-a.b.c.x" | ||
if [[ "$input_branch" =~ ^release-([0-9]+)\.([0-9]+)\.x$ ]] || [[ "$input_branch" =~ ^release-([0-9]+)\.([0-9]+)\.([0-9]+)\.x$ ]]; then | ||
# Extract the MAJOR part of the branch name | ||
MAJOR=${BASH_REMATCH[1]} | ||
# Calculate the XETABASE_MAJOR by subtracting 3 from MAJOR | ||
XETABASE_MAJOR=$((MAJOR - 1)) | ||
# Check if the XETABASE_MAJOR is negative | ||
if (( XETABASE_MAJOR < 0 )); then | ||
echo "Error: 'MAJOR' digit after subtraction results in a negative number." | ||
return 1 | ||
fi | ||
# Construct and echo the new branch name | ||
echo "release-$XETABASE_MAJOR.${input_branch#release-$MAJOR.}" | ||
return 0 | ||
fi | ||
|
||
# If the branch name does not match any of the expected patterns | ||
echo "Error: The branch name is not correct." | ||
return 1 | ||
} | ||
|
||
# Check if the script receives exactly one argument | ||
if [ "$#" -ne 1 ]; then | ||
echo "Usage: $0 <branch-name>" | ||
exit 1 | ||
fi | ||
|
||
# Call the function with the input branch name | ||
get_xetabase_branch "$1" |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Oops, something went wrong.