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RHOAIENG-10783: fix(Dockerfiles): combine fix-permissions RUN with the preceding RUN when possible #635

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merged 5 commits into from
Aug 7, 2024

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@jiridanek jiridanek commented Jul 24, 2024

  • RHOAIENG-10783 Optimize ROCm images to reduce the size so they can be built on OpenShift CI

Fixes #539

Makes changes to more images than

Description

The below step in jupyter-pytorch-ubi9-python-3_9 and probably other images creates a large layer. Fix the permissions in the previous step already.

STEP 5/5: RUN chmod -R g+w /opt/app-root/lib/python3.9/site-packages &&     fix-permissions /opt/app-root -P
COMMIT ghcr.io/jiridanek/notebooks/workbench-images:jupyter-pytorch-ubi9-python-3.9-2024a_20240523

Note that changing the metadata of files, for example, changing file permissions or ownership of a file, can also result in a copy_up operation, therefore duplicating the file to the writable layer.

from https://docs.docker.com/storage/storagedriver/

How Has This Been Tested?

Build images in CI, check sizes.

After:

jupyter-pytorch-ubi9-python-3.9-7d67798ec8625f47b5152882b27a2b79da8745dd           5bfda56883dc  2 minutes ago   20.6 GB

Before:

jupyter-pytorch-ubi9-python-3.9-main_4520c936792a92270f31044ac81e542a90ba6929           0c3707b5a463  5 days ago   25.9 GB

The pytorch images show the largest size difference, for the other images the impact is very small.

Merge criteria:

  • The commits are squashed in a cohesive manner and have meaningful messages.
  • Testing instructions have been added in the PR body (for PRs involving changes that are not immediately obvious).
  • The developer has manually tested the changes and verified that the changes work

@jiridanek jiridanek added trivy-scan This label that allows trivy to create a security report on the pull requests tide/merge-method-squash labels Jul 24, 2024
@jiridanek jiridanek changed the title Jd nocachedir RHOAIENG-9853: fix(Dockerfiles): combine fix-permissions RUN with the preceding RUN when possible Jul 24, 2024
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This is good work, definitely these RUN's can be clubbed.
If possible, can we add some description, please.
also do we want to have these task to tracked under trivy, or separate JIRA ?

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If possible, can we add some description, please.

I linked the Fixes #539, isn't it sufficient? I'll copy the desc from there to here then.

also do we want to have these task to tracked under trivy, or separate JIRA ?

Not sure which is better. The previous RUN commands change (#634) was not tracked under anything. This makes the image for trivy scan smaller, so it should be fine to track under trivy, i think.

@jiridanek jiridanek changed the title RHOAIENG-9853: fix(Dockerfiles): combine fix-permissions RUN with the preceding RUN when possible RHOAIENG-10783: fix(Dockerfiles): combine fix-permissions RUN with the preceding RUN when possible Aug 2, 2024
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jstourac commented Aug 7, 2024

/lgtm

Thank you 🎸

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@jiridanek could you please rebase this PR to pick up #652?

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/lgtm

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/override ci/prow/images
/override ci/prow/habana-notebooks-e2e-tests
/override ci/prow/notebooks-ubi9-e2e-tests
/override ci/prow/rocm-notebooks-e2e-tests
/override ci/prow/notebooks-ubi8-e2e-tests

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openshift-ci bot commented Aug 7, 2024

@jiridanek: Overrode contexts on behalf of jiridanek: ci/prow/habana-notebooks-e2e-tests, ci/prow/images, ci/prow/notebooks-ubi8-e2e-tests, ci/prow/notebooks-ubi9-e2e-tests, ci/prow/rocm-notebooks-e2e-tests

In response to this:

/override ci/prow/images
/override ci/prow/habana-notebooks-e2e-tests
/override ci/prow/notebooks-ubi9-e2e-tests
/override ci/prow/rocm-notebooks-e2e-tests
/override ci/prow/notebooks-ubi8-e2e-tests

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jiridanek commented Aug 7, 2024

localhost:5000/workbench-images                                jupyter-pytorch-ubi9-python-3.9-3e35325d9e373ab7ab80f90407c64680be319b8c           339e75337381  2 minutes ago   20.6 GB
localhost:5000/workbench-images                                rocm-jupyter-pytorch-ubi9-python-3.9-3e35325d9e373ab7ab80f90407c64680be319b8c      26a5e8dfe20a  2 minutes ago   37.8 GB
localhost:5000/workbench-images                                cuda-jupyter-tensorflow-ubi9-python-3.9-3e35325d9e373ab7ab80f90407c64680be319b8c   47ddd578c751  59 seconds ago  18.7 GB
localhost:5000/workbench-images                                cuda-jupyter-datascience-ubi8-python-3.8-3e35325d9e373ab7ab80f90407c64680be319b8c  203356d021ed  13 seconds ago  14.7 GB

these are the first four newly built images after the changes

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ghcr.io/opendatahub-io/notebooks/workbench-images              jupyter-pytorch-ubi9-python-3.9-main_f84cf6981bcad1c9a81c9f5c600005fe4c4c5164           a7f31eb5e5ff  4 days ago  25.9 GB

looking at latest main, pytorch, where the savings are the most significant, shrank by ~5GB by doing this!

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/approve

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openshift-ci bot commented Aug 7, 2024

[APPROVALNOTIFIER] This PR is APPROVED

This pull-request has been approved by: jiridanek

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jiridanek commented Aug 7, 2024

/override ci/prow/notebooks-ubi8-e2e-tests

failed due to failed image builds, known issue already present on main

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openshift-ci bot commented Aug 7, 2024

@jiridanek: Overrode contexts on behalf of jiridanek: ci/prow/notebooks-ubi8-e2e-tests

In response to this:

/override ci/prow/notebooks-ubi8-e2e-tests

failed due to failed image builds

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/override nosuchjob

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openshift-ci bot commented Aug 7, 2024

@jiridanek: /override requires failed status contexts, check run or a prowjob name to operate on.
The following unknown contexts/checkruns were given:

  • nosuchjob

Only the following failed contexts/checkruns were expected:

  • ci/prow/habana-notebooks-e2e-tests
  • ci/prow/images
  • ci/prow/notebook-cuda-jupyter-ds-ubi8-python-3-8-pr-image-mirror
  • ci/prow/notebook-cuda-jupyter-ds-ubi9-python-3-9-pr-image-mirror
  • ci/prow/notebook-cuda-jupyter-minimal-ubi8-python-3-8-pr-image-mirror
  • ci/prow/notebook-cuda-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
  • ci/prow/notebook-cuda-jupyter-tf-ubi9-python-3-9-pr-image-mirror
  • ci/prow/notebook-habana-1-10-0-ubi8-python-3-8-pr-image-mirror
  • ci/prow/notebook-habana-1-13-0-ubi8-python-3-8-pr-image-mirror
  • ci/prow/notebook-jupyter-datascience-ubi8-python-3-8-pr-image-mirror
  • ci/prow/notebook-jupyter-datascience-ubi9-python-3-9-pr-image-mirror
  • ci/prow/notebook-jupyter-minimal-ubi8-python-3-8-pr-image-mirror
  • ci/prow/notebook-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
  • ci/prow/notebook-jupyter-pytorch-ubi9-python-3-9-pr-image-mirror
  • ci/prow/notebook-jupyter-trustyai-ubi9-python-3-9-pr-image-mirror
  • ci/prow/notebook-rocm-jupyter-pyt-ubi9-python-3-9-pr-image-mirror
  • ci/prow/notebook-rocm-jupyter-tf-ubi9-python-3-9-pr-image-mirror
  • ci/prow/notebooks-ubi8-e2e-tests
  • ci/prow/notebooks-ubi9-e2e-tests
  • ci/prow/rocm-notebooks-e2e-tests
  • pull-ci-opendatahub-io-notebooks-2023a-images
  • pull-ci-opendatahub-io-notebooks-main-habana-notebooks-e2e-tests
  • pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-ds-ubi8-python-3-8-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-ds-ubi9-python-3-9-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-minimal-ubi8-python-3-8-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-tf-ubi9-python-3-9-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebook-habana-1-10-0-ubi8-python-3-8-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebook-habana-1-13-0-ubi8-python-3-8-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-datascience-ubi8-python-3-8-pr-image-mirror
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  • pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-pytorch-ubi9-python-3-9-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-trustyai-ubi9-python-3-9-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebook-rocm-jupyter-pyt-ubi9-python-3-9-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebook-rocm-jupyter-tf-ubi9-python-3-9-pr-image-mirror
  • pull-ci-opendatahub-io-notebooks-main-notebooks-ubi8-e2e-tests
  • pull-ci-opendatahub-io-notebooks-main-notebooks-ubi9-e2e-tests
  • pull-ci-opendatahub-io-notebooks-main-rocm-notebooks-e2e-tests
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If you are trying to override a checkrun that has a space in it, you must put a double quote on the context.

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/override ci/prow/habana-notebooks-e2e-tests
/override ci/prow/images
/override ci/prow/notebook-cuda-jupyter-ds-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-cuda-jupyter-ds-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-cuda-jupyter-minimal-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-cuda-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-cuda-jupyter-tf-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-habana-1-10-0-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-habana-1-13-0-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-jupyter-datascience-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-jupyter-datascience-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-jupyter-minimal-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-jupyter-pytorch-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-jupyter-trustyai-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-rocm-jupyter-pyt-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-rocm-jupyter-tf-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebooks-ubi8-e2e-tests
/override ci/prow/notebooks-ubi9-e2e-tests
/override ci/prow/rocm-notebooks-e2e-tests
/override pull-ci-opendatahub-io-notebooks-2023a-images
/override pull-ci-opendatahub-io-notebooks-main-habana-notebooks-e2e-tests
/override pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-ds-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-ds-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-minimal-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-tf-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-habana-1-10-0-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-habana-1-13-0-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-datascience-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-datascience-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-minimal-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-pytorch-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-trustyai-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-rocm-jupyter-pyt-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-rocm-jupyter-tf-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebooks-ubi8-e2e-tests
/override pull-ci-opendatahub-io-notebooks-main-notebooks-ubi9-e2e-tests
/override pull-ci-opendatahub-io-notebooks-main-rocm-notebooks-e2e-tests

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openshift-ci bot commented Aug 7, 2024

@jiridanek: Overrode contexts on behalf of jiridanek: ci/prow/habana-notebooks-e2e-tests, ci/prow/images, ci/prow/notebook-cuda-jupyter-ds-ubi8-python-3-8-pr-image-mirror, ci/prow/notebook-cuda-jupyter-ds-ubi9-python-3-9-pr-image-mirror, ci/prow/notebook-cuda-jupyter-minimal-ubi8-python-3-8-pr-image-mirror, ci/prow/notebook-cuda-jupyter-minimal-ubi9-python-3-9-pr-image-mirror, ci/prow/notebook-cuda-jupyter-tf-ubi9-python-3-9-pr-image-mirror, ci/prow/notebook-habana-1-10-0-ubi8-python-3-8-pr-image-mirror, ci/prow/notebook-habana-1-13-0-ubi8-python-3-8-pr-image-mirror, ci/prow/notebook-jupyter-datascience-ubi8-python-3-8-pr-image-mirror, ci/prow/notebook-jupyter-datascience-ubi9-python-3-9-pr-image-mirror, ci/prow/notebook-jupyter-minimal-ubi8-python-3-8-pr-image-mirror, ci/prow/notebook-jupyter-minimal-ubi9-python-3-9-pr-image-mirror, ci/prow/notebook-jupyter-pytorch-ubi9-python-3-9-pr-image-mirror, ci/prow/notebook-jupyter-trustyai-ubi9-python-3-9-pr-image-mirror, ci/prow/notebook-rocm-jupyter-pyt-ubi9-python-3-9-pr-image-mirror, ci/prow/notebook-rocm-jupyter-tf-ubi9-python-3-9-pr-image-mirror, ci/prow/notebooks-ubi8-e2e-tests, ci/prow/notebooks-ubi9-e2e-tests, ci/prow/rocm-notebooks-e2e-tests

In response to this:

/override ci/prow/habana-notebooks-e2e-tests
/override ci/prow/images
/override ci/prow/notebook-cuda-jupyter-ds-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-cuda-jupyter-ds-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-cuda-jupyter-minimal-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-cuda-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-cuda-jupyter-tf-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-habana-1-10-0-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-habana-1-13-0-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-jupyter-datascience-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-jupyter-datascience-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-jupyter-minimal-ubi8-python-3-8-pr-image-mirror
/override ci/prow/notebook-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-jupyter-pytorch-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-jupyter-trustyai-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-rocm-jupyter-pyt-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-rocm-jupyter-tf-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebooks-ubi8-e2e-tests
/override ci/prow/notebooks-ubi9-e2e-tests
/override ci/prow/rocm-notebooks-e2e-tests
/override pull-ci-opendatahub-io-notebooks-2023a-images
/override pull-ci-opendatahub-io-notebooks-main-habana-notebooks-e2e-tests
/override pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-ds-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-ds-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-minimal-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-cuda-jupyter-tf-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-habana-1-10-0-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-habana-1-13-0-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-datascience-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-datascience-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-minimal-ubi8-python-3-8-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-pytorch-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-jupyter-trustyai-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-rocm-jupyter-pyt-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebook-rocm-jupyter-tf-ubi9-python-3-9-pr-image-mirror
/override pull-ci-opendatahub-io-notebooks-main-notebooks-ubi8-e2e-tests
/override pull-ci-opendatahub-io-notebooks-main-notebooks-ubi9-e2e-tests
/override pull-ci-opendatahub-io-notebooks-main-rocm-notebooks-e2e-tests

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@jiridanek: The following tests failed, say /retest to rerun all failed tests or /retest-required to rerun all mandatory failed tests:

Test name Commit Details Required Rerun command
ci/prow/runtime-rocm-tensorflow-ubi9-python-3-9-pr-image-mirror 1fdba81 link true /test runtime-rocm-tensorflow-ubi9-python-3-9-pr-image-mirror
ci/prow/runtime-rocm-pytorch-ubi9-python-3-9-pr-image-mirror 1fdba81 link true /test runtime-rocm-pytorch-ubi9-python-3-9-pr-image-mirror
ci/prow/rocm-runtimes-ubi9-e2e-tests 1fdba81 link true /test rocm-runtimes-ubi9-e2e-tests
ci/prow/runtimes-ubi8-e2e-tests 1fdba81 link true /test runtimes-ubi8-e2e-tests
ci/prow/runtimes-ubi9-e2e-tests 1fdba81 link true /test runtimes-ubi9-e2e-tests

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/override ci/prow/notebook-cuda-jupyter-ds-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-cuda-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-jupyter-pytorch-ubi9-python-3-9-pr-image-mirror

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openshift-ci bot commented Aug 7, 2024

@jiridanek: Overrode contexts on behalf of jiridanek: ci/prow/notebook-cuda-jupyter-ds-ubi9-python-3-9-pr-image-mirror, ci/prow/notebook-cuda-jupyter-minimal-ubi9-python-3-9-pr-image-mirror, ci/prow/notebook-jupyter-pytorch-ubi9-python-3-9-pr-image-mirror

In response to this:

/override ci/prow/notebook-cuda-jupyter-ds-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-cuda-jupyter-minimal-ubi9-python-3-9-pr-image-mirror
/override ci/prow/notebook-jupyter-pytorch-ubi9-python-3-9-pr-image-mirror

Instructions for interacting with me using PR comments are available here. If you have questions or suggestions related to my behavior, please file an issue against the kubernetes-sigs/prow repository.

@openshift-merge-bot openshift-merge-bot bot merged commit 9ed174f into opendatahub-io:main Aug 7, 2024
33 checks passed
caponetto added a commit to caponetto/opendatahub-io-notebooks that referenced this pull request Aug 7, 2024
caponetto added a commit to caponetto/opendatahub-io-notebooks that referenced this pull request Aug 7, 2024
caponetto added a commit to caponetto/opendatahub-io-notebooks that referenced this pull request Aug 8, 2024
openshift-merge-bot bot pushed a commit that referenced this pull request Aug 16, 2024
* Add images based on python 3.11

* Apply #656 to Python 3.11 images

* Fix expected TF vesion on the test file

* Fix labels for Python 3.11

* Apply #652 to Python 3.11 images

* Update lock to fix debugpy package version

* Apply #635 to Python 3.11 images

* Replace 3-9 -> 3-11 leftovers

* Fix runtime rocm image name according to openshift/release

* Apply #667 to Python 3.11 images

* Adapt test code for Python 3.11 images
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