Bump JNA from 5.5 to 5.13

[austintlee]

Description

JNA version of 5.5 is still used causing some issues running integTest on Mac M1/2. JNA 5.7 introduced support for Mac aarch64. I see that we are already using JNA 5.13 in 'server'.

Related Issues

Resolves #[Issue number to be closed when this PR is merged]

Check List

• New functionality includes testing.
  • All tests pass
• New functionality has been documented.
  • New functionality has javadoc added
• Commits are signed per the DCO using --signoff
• Commit changes are listed out in CHANGELOG.md file (See: Changelog)

By submitting this pull request, I confirm that my contribution is made under the terms of the Apache 2.0 license.
For more information on following Developer Certificate of Origin and signing off your commits, please check here.

[github-actions]

Compatibility status:

Checks if related components are compatible with change 37a5dd0

Incompatible components

Incompatible components: [https://github.com/opensearch-project/security.git]

Skipped components

Compatible components

Compatible components: [https://github.com/opensearch-project/alerting.git, https://github.com/opensearch-project/index-management.git, https://github.com/opensearch-project/sql.git, https://github.com/opensearch-project/anomaly-detection.git, https://github.com/opensearch-project/job-scheduler.git, https://github.com/opensearch-project/asynchronous-search.git, https://github.com/opensearch-project/observability.git, https://github.com/opensearch-project/common-utils.git, https://github.com/opensearch-project/k-nn.git, https://github.com/opensearch-project/reporting.git, https://github.com/opensearch-project/cross-cluster-replication.git, https://github.com/opensearch-project/security-analytics.git, https://github.com/opensearch-project/custom-codecs.git, https://github.com/opensearch-project/performance-analyzer.git, https://github.com/opensearch-project/ml-commons.git, https://github.com/opensearch-project/performance-analyzer-rca.git, https://github.com/opensearch-project/opensearch-oci-object-storage.git, https://github.com/opensearch-project/geospatial.git, https://github.com/opensearch-project/notifications.git, https://github.com/opensearch-project/neural-search.git]

[github-actions]

Gradle Check (Jenkins) Run Completed with:

• RESULT: UNSTABLE ❕
• TEST FAILURES:

      1 org.opensearch.repositories.azure.AzureBlobContainerRetriesTests.testReadRangeBlobWithRetries

• URL: https://build.ci.opensearch.org/job/gradle-check/25273/
• CommitID: abca57d
  Please review all flaky tests that succeeded after retry and create an issue if one does not already exist to track the flaky failure.

[codecov]

Codecov Report

Merging #9963 (abca57d) into main (c100c0c) will decrease coverage by 0.02%.
Report is 3 commits behind head on main.
The diff coverage is 100.00%.

❗ Current head abca57d differs from pull request most recent head 37a5dd0. Consider uploading reports for the commit 37a5dd0 to get more accurate results

@@             Coverage Diff              @@
##               main    #9963      +/-   ##
============================================
- Coverage     71.16%   71.15%   -0.02%     
+ Complexity    58114    58109       -5     
============================================
  Files          4824     4824              
  Lines        273897   273897              
  Branches      39910    39910              
============================================
- Hits         194926   194887      -39     
- Misses        62573    62664      +91     
+ Partials      16398    16346      -52     

Files Changed	Coverage Δ
...main/java/org/opensearch/common/collect/Tuple.java	64.70% <ø> (ø)
...java/org/opensearch/common/crypto/DataKeyPair.java	0.00% <ø> (ø)
...h/common/crypto/DecryptedRangedStreamProvider.java	0.00% <ø> (ø)
...g/opensearch/compress/spi/CompressionProvider.java	100.00% <ø> (ø)
...cli/src/main/java/org/opensearch/cli/Terminal.java	74.73% <100.00%> (ø)

... and 487 files with indirect coverage changes

[github-actions]

Gradle Check (Jenkins) Run Completed with:

• RESULT: UNSTABLE ❕
• TEST FAILURES:

      1 org.opensearch.search.basic.SearchWithRandomIOExceptionsIT.testRandomDirectoryIOExceptions
      1 org.opensearch.search.basic.SearchWithRandomIOExceptionsIT.classMethod

• URL: https://build.ci.opensearch.org/job/gradle-check/25272/
• CommitID: 1b6d88d
  Please review all flaky tests that succeeded after retry and create an issue if one does not already exist to track the flaky failure.

[reta]

@austintlee could you please fix DCO check? thank you

[austintlee]

@reta it's a Github settings issue. I think it's because my primary email does not match what's in my signature.

Commit sha: [1b6d88d](https://github.com/opensearch-project/OpenSearch/pull/9963/commits/1b6d88df30968a65be09eafe16c62670bf02ec3d), Author: Austin Lee, Committer: GitHub; Can not find "Austin Lee [[email protected]](mailto:[email protected])", in ["Austin Lee [[email protected]](mailto:[email protected])", "Austin Lee [[email protected]](mailto:[email protected])", "Austin Lee [[email protected]](mailto:[email protected])", "Austin Lee [[email protected]](mailto:[email protected])"].

I switched my primary email, but I think we can override this check since I do have a proper DCO in every commit? Or can you force it to re-run the check? I don't know for certain exactly how Github is picking up that old email (I did use it for my first few contributions).

[reta]

I switched my primary email, but I think we can override this check since I do have a proper DCO in every commit? Or can you force it to re-run the check?

We could override DCO check when the only option, but you could amend the last commit and do force push to fix the issue.

[austintlee]

The problem is that that would require me to use an email that I don't want to put in the DCO. Since I corrected my email in my Github settings, do you think we can rerun the DCO check?

[github-actions]

Gradle Check (Jenkins) Run Completed with:

• RESULT: ❌
• URL: https://build.ci.opensearch.org/job/gradle-check/25324/
• CommitID: 37a5dd0
  Please examine the workflow log, locate, and copy-paste the failure(s) below, then iterate to green.
  Is the failure a flaky test unrelated to your change?

[github-actions]

Gradle Check (Jenkins) Run Completed with:

• RESULT: SUCCESS ✅
• URL: https://build.ci.opensearch.org/job/gradle-check/25326/
• CommitID: 37a5dd0

[opensearch-trigger-bot]

The backport to 2.x failed:

The process '/usr/bin/git' failed with exit code 128

To backport manually, run these commands in your terminal:

# Navigate to the root of your repository
cd $(git rev-parse --show-toplevel)
# Fetch latest updates from GitHub
git fetch
# Create a new working tree
git worktree add ../.worktrees/OpenSearch/backport-2.x 2.x
# Navigate to the new working tree
pushd ../.worktrees/OpenSearch/backport-2.x
# Create a new branch
git switch --create backport/backport-9963-to-2.x
# Cherry-pick the merged commit of this pull request and resolve the conflicts
git cherry-pick -x --mainline 1 04f90dc3a1e859cc2caf87a223006c188a1252f4
# Push it to GitHub
git push --set-upstream origin backport/backport-9963-to-2.x
# Go back to the original working tree
popd
# Delete the working tree
git worktree remove ../.worktrees/OpenSearch/backport-2.x

Then, create a pull request where the base branch is 2.x and the compare/head branch is backport/backport-9963-to-2.x.

[reta]

@austintlee sadly needs manual backport to 2.x

[austintlee]

I'm on it!