Repositories list

• jobqueue

  Public
  Queue and Run Asynchronous Interruptible R Tasks on Background Processes

  R

  •

  Other

  •0•0•0•0•Updated Oct 5, 2024Oct 5, 2024

• rbiom

  Public
  Interact with Biological Observation Matrix files.

  R

  •

  Other

  •0•12•3•0•Updated Aug 7, 2024Aug 7, 2024

• fillpattern

  Public
  Patterned Fills for 'ggplot2' and 'grid' Graphics

  R

  •

  Other

  •0•5•0•0•Updated Jun 24, 2024Jun 24, 2024

• TX_wastewater_virome

  Public
  HTML

  •0•5•1•0•Updated Mar 7, 2024Mar 7, 2024

• EsViritu

  Public
  Read mapping pipeline for detection and measurement of virus pathogens from metagenomic or clinical data

  bioinformaticsngsmetagenomics+ 2virusespathogens

  Shell

  •

  MIT License

  •3•19•7•0•Updated Nov 27, 2023Nov 27, 2023

• Marker-MAGu

  Public
  Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes

  Python

  •

  MIT License

  •0•8•2•0•Updated Oct 17, 2023Oct 17, 2023

• aesInput

  Public
  Choose colors, shapes, or patterns for each selectize option in Shiny.

  JavaScript

  •

  GNU Affero General Public License v3.0

  •0•0•0•0•Updated Sep 30, 2021Sep 30, 2021

• virmap

  Public
  Perl

  •

  GNU Affero General Public License v3.0

  •14•25•17•0•Updated Feb 2, 2021Feb 2, 2021

• covid

  Public archive
  COVID-19 Dashboard coded in Shiny R

  R

  •

  GNU Affero General Public License v3.0

  •1•0•0•0•Updated Jun 26, 2020Jun 26, 2020

• puma-deprecated

  Public archive
  Code for the unreleased/unpublished PUMA pipeline.

  Perl

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jan 7, 2020Jan 7, 2020

• NashMicrobiome2017

  Public archive
  Pipeline for Fungal Community Analysis

  Perl

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jul 19, 2017Jul 19, 2017