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48 repositories
pertpy
PublicPerturbation Analysis in the scverse ecosystem.- Deep probabilistic analysis of single-cell and spatial omics data
anndata
PublicAnnotated data.- Spatial Single Cell Analysis in Python
rapids_singlecell
PublicRapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.- Interactive visualization of spatial omics data
- Example repository generated from https://github.com/scverse/cookiecutter-scverse. This repo is updated automatically to match the latest version of the template.
scvi-tutorials
Publicscirpy
PublicMuon.jl
Publicbenchmark
Publicecosystem-packages
PublicRegistry for scverse ecosystem packages (https://scverse.org/packages/#ecosystem)prelude-runner
Publicscverse-tutorials
Publicscanpy-tutorials
Publicscverse.github.io
Publicspatialdata-notebooks
Publicspatialdata-io
Publicsimple-scvi
Publicscanpy
PublicSingle-cell analysis in Python. Scales to >1M cells.pytometry
Publicplotting_api
Publicgenomic-features
PublicanndataR
Publicanndata-tutorials
Public