update CI workflows

pangeo-data · Jul 4, 2024 · a528afe · a528afe
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commit a528afe
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Showing 6 changed files with 44 additions and 27 deletions.
diff --git a/.github/workflows/benchmarks.yml b/.github/workflows/benchmarks.yml
@@ -10,30 +10,36 @@ jobs:
   benchmark:
     if: ${{ contains( github.event.pull_request.labels.*.name, 'run-benchmark') && github.event_name == 'pull_request' || github.event_name == 'workflow_dispatch' }}
     name: Linux
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     env:
       ASV_DIR: "./asv_bench"
-
+    defaults:
+      run:
+        shell: bash -l {0}
+    strategy:
+      matrix:
+        python-version: ["3.10"]
     steps:
       # We need the full repo to avoid this issue
       # https://github.com/actions/checkout/issues/23
       - uses: actions/checkout@v4
         with:
           fetch-depth: 0
 
-      - name: Setup Miniconda
-        uses: conda-incubator/setup-miniconda@v3
+      - name: Set up conda (micromamba)
+        uses: mamba-org/setup-micromamba@v1
         with:
-          # installer-url: https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh
-          installer-url: https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-Linux-x86_64.sh
+          environment-name: climpred-benchmarks
+          cache-environment: true
+          create-args: >-
+            python=${{ matrix.python-version }}
+            conda
 
-      - name: Setup some dependencies
-        shell: bash -l {0}
+      - name: Set Up Dependencies
         run: |
-          pip install asv
+          python -m pip install asv
           sudo apt-get update -y
       - name: Run benchmarks
-        shell: bash -l {0}
         id: benchmark
         env:
           OPENBLAS_NUM_THREADS: 1

diff --git a/.github/workflows/climpred_installs.yml b/.github/workflows/climpred_installs.yml
@@ -25,42 +25,44 @@ jobs:
           keyword: "[skip-ci]"
 
   install-climpred-complete:  # Installs climpred on various OS.
-    name: Install climpred[complete], ${{ matrix.os }}
+    name: Install climpred[complete], ${{ matrix.os }}, Python${{ matrix.python-version }}
     runs-on: ${{ matrix.os }}
     needs: detect-ci-trigger
     if: needs.detect-ci-trigger.outputs.triggered == 'false'
     strategy:
       fail-fast: false
       matrix:
         os: ["ubuntu-latest", "macos-latest", "windows-latest"]
+        python-version: ["3.9"]
     steps:
     - uses: actions/checkout@v4
     - name: Setup Python
       uses: actions/setup-python@v5
       with:
-        python-version: 3.9
+        python-version: ${{ matrix.python-version }}
     - name: Install dependencies
       run: |
         pip install -e .[complete]
         python -c "import climpred"
 
   install-climpred:  # Installs climpred on various OS.
-    name: Install climpred, ${{ matrix.os }}
+    name: Install climpred, ${{ matrix.os }}, Python${{ matrix.python-version }}
     runs-on: ${{ matrix.os }}
     needs: detect-ci-trigger
     if: needs.detect-ci-trigger.outputs.triggered == 'false'
     strategy:
       fail-fast: false
       matrix:
         os: ["ubuntu-latest", "macos-latest", "windows-latest"]
+        python-version: ["3.9"]
     steps:
     - uses: actions/checkout@v4
       with:
         fetch-depth: 0 # Fetch all history for all branches and tags.
     - name: Setup Python
       uses: actions/setup-python@v5
       with:
-        python-version: 3.9
+        python-version: ${{ matrix.python-version }}
     - name: Install dependencies
       run: |
         pip install -e .

diff --git a/.github/workflows/climpred_testing.yml b/.github/workflows/climpred_testing.yml
@@ -27,13 +27,16 @@ jobs:
           keyword: "[skip-ci]"
 
   minimum-test:  # Runs testing suite with minimal dependencies
-    name: Test minimum dependencies, Python3.9
+    name: Test minimum dependencies, Python${{ matrix.python-version }}
     runs-on: ubuntu-latest
     needs: detect-ci-trigger
     if: needs.detect-ci-trigger.outputs.triggered == 'false'
     defaults:
         run:
           shell: bash -l {0}
+    strategy:
+      matrix:
+        python-version: ["3.9"]
     steps:
       - uses: actions/checkout@v4
         with:
@@ -45,7 +48,7 @@ jobs:
           environment-name: climpred-minimum-tests
           cache-environment: true
           create-args: >-
-            python=3.9
+            python=${{ matrix.python-version }}
             conda
       - name: Install climpred
         run: |
@@ -96,9 +99,9 @@ jobs:
           environment-file: ci/requirements/maximum-tests.yml
           environment-name: climpred-maximum-tests
           cache-environment: true
-          cache-environment-key: "${{runner.os}}-${{runner.arch}}-py${{matrix.python-version}}-${{env.TODAY}}-${{hashFiles(env.CONDA_ENV_FILE)}}"
+          cache-environment-key: "${{ runner.os }}-${{ runner.arch }}-py${{ matrix.python-version }}-${{ env.TODAY }}-${{ hashFiles(env.CONDA_ENV_FILE) }}"
           create-args: >-
-            python=${{matrix.python-version}}
+            python=${{ matrix.python-version }}
             conda
       - name: Install climpred[complete]
         run: |
@@ -128,11 +131,14 @@ jobs:
           fail_ci_if_error: false
 
   doctest:  # tests all docstrings
-    name: Doctests, Python3.9
-    runs-on: "ubuntu-latest"
+    name: Doctests, Python${{ matrix.python-version }}
+    runs-on: ubuntu-latest
     defaults:
       run:
         shell: bash -l {0}
+    strategy:
+      matrix:
+        python-version: ["3.9"]
     steps:
       - uses: actions/checkout@v4
       - name: Setup conda (micromamba)
@@ -142,7 +148,7 @@ jobs:
           environment-name: climpred-maximum-tests
           cache-environment: true
           create-args: >-
-            python=3.9
+            python=${{ matrix.python-version }}
             conda
       - name: Install climpred[complete]
         run: |
@@ -156,14 +162,17 @@ jobs:
           conda list
       - name: Run doctests
         run: |
-          python -m pytest --doctest-modules climpred --ignore climpred/tests
+          python -m pytest --doctest-modules src/climpred --ignore src/climpred/tests
 
   notebooks:  # Checks that pre-compiled notebooks in docs still work.
-    name: Notebooks, Python3.9
+    name: Notebooks, Python${{ matrix.python-version }}
     runs-on: ubuntu-latest
     defaults:
         run:
           shell: bash -l {0}
+    strategy:
+      matrix:
+        python-version: ["3.9"]
     steps:
       - uses: actions/checkout@v4
       - name: Set up conda (micromamba)
@@ -173,7 +182,7 @@ jobs:
           environment-name: climpred-docs
           cache-environment: true
           create-args: >-
-            python=3.9
+            python=${{ matrix.python-version }}
             conda
       - name: Install climpred
         run: |

diff --git a/.github/workflows/publish-production-pypi.yml b/.github/workflows/publish-production-pypi.yml
@@ -17,7 +17,7 @@ jobs:
       - name: Set up Python3
         uses: actions/setup-python@v5
         with:
-          python-version: '3.x'
+          python-version: "3.x"
       - name: Install packaging libraries
         run: |
           python -m pip install --upgrade pip

diff --git a/.github/workflows/publish-staging-testpypi.yml b/.github/workflows/publish-staging-testpypi.yml
@@ -34,7 +34,7 @@ jobs:
     - name: Set up Python3
       uses: actions/setup-python@v5
       with:
-        python-version: '3.x'
+        python-version: "3.x"
     - name: Install packaging libraries
       run: |
         python -m pip install --upgrade pip

diff --git a/.github/workflows/upstream-dev-ci.yml b/.github/workflows/upstream-dev-ci.yml
@@ -28,7 +28,7 @@ jobs:
           keyword: "[test-upstream]"
 
   upstream-dev:
-    name: upstream-dev
+    name: upstream-dev, Python${{ matrix.python-version }}
     runs-on: ubuntu-latest
     needs: detect-ci-trigger
     if: |