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version: 2 | ||
jobs: | ||
build: | ||
docker: | ||
- image: circleci/python:3.6.6 | ||
steps: | ||
- checkout | ||
- run: sudo chown -R circleci:circleci /usr/local/bin | ||
- run: sudo chown -R circleci:circleci /usr/local/lib/python3.6/site-packages | ||
- restore_cache: # ensure this step occurs *before* installing dependencies | ||
key: deps9-{{ .Branch }}-{{ checksum "Pipfile.lock" }} | ||
- run: | ||
command: | | ||
sudo pip install pipenv==2018.7.1 | ||
pipenv install | ||
- save_cache: | ||
key: deps9-{{ .Branch }}-{{ checksum "Pipfile.lock" }} | ||
paths: | ||
- ".venv" | ||
- "/usr/local/bin" | ||
- "/usr/local/lib/python3.6/site-packages" | ||
- run: | ||
name: generate docs | ||
command: pipenv run mkdocs build --clean --strict --verbose | ||
- store_artifacts: | ||
path: site |
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site/ |
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[[source]] | ||
url = "https://pypi.org/simple" | ||
verify_ssl = true | ||
name = "pypi" | ||
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[packages] | ||
mkdocs = "==1.0.4" | ||
mkdocs-material = "==3.0.4" | ||
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[dev-packages] | ||
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[requires] | ||
python_version = "3.6" |
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site_name: Brain Imaging Data Structure | ||
theme: material | ||
plugins: | ||
- search | ||
docs_dir: 'src' | ||
use_directory_urls: false | ||
nav: | ||
- The BIDS Specification: | ||
- Introduction: 01-introduction.md | ||
- Common principles: 02-common-principles.md | ||
- Modality agnostic files: 03-modality-agnostic-files.md | ||
- Modality specific files: | ||
- Magnetic Resonance Imaging: 04-modality-specific-files/01-magnetic-resonance-imaging-data.md | ||
- Magnetoencephalography: 04-modality-specific-files/02-magnetoencephalography.md | ||
- Task events: 04-modality-specific-files/03-task-events.md | ||
- Physiological and other continous recordings: 04-modality-specific-files/04-physiological-and-other-continous-recordings.md | ||
- Behavioral experiments (with no MRI): 04-modality-specific-files/05-behavioural-experiments.md | ||
- Longitudinal and multi-site studies: 05-longitudinal-and-multi-site-studies.md | ||
- The BIDS Starter Kit: https://github.com/bids-standard/bids-starter-kit |
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build: | ||
image: latest | ||
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python: | ||
version: 3.6 |
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mkdocs-material |
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# The Brain Imaging Data Structure | ||
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This site serves as an online resource to see the current state of the | ||
Brain Imaging Data Structure (BIDS) specification. It contains information | ||
about the core specification, as well as many modality-specific extensions. | ||
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To get started, [check out the introduction](01-introduction.md). If you'd like | ||
more information on how to adapt your own datasets to match the BIDS | ||
specification, we recommend exploring the [bids-specification starter kit](https://github.com/bids-standard/bids-starter-kit). |